Gene : Potri.018G091401 P. trichocarpa v3.1
Defline:  (1 of 3) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS) Genomic Order:  934
Name:  ? Potri.018G091401 Secondary Identifier:  ? PAC:37248241
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CALVIN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-5723 Populus trichocarpa pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G091401 0.5kb upstream 0.5kb upstream 1970 true Chr18: 12055107-12057076 Populus trichocarpa
Potri.018G091401 0.5kb upstream 0.5kb upstream 500 false Chr18: 12056577-12057076 Populus trichocarpa
Potri.018G091401 0.5kb downstream 0.5kb downstream 1970 true Chr18: 12054607-12056576 Populus trichocarpa
Potri.018G091401 0.5kb downstream 0.5kb downstream 500 false Chr18: 12054607-12055106 Populus trichocarpa
Potri.018G091401 1.0kb upstream 1.0kb upstream 2470 true Chr18: 12055107-12057576 Populus trichocarpa
Potri.018G091401 1.0kb upstream 1.0kb upstream 1000 false Chr18: 12056577-12057576 Populus trichocarpa
Potri.018G091401 1.0kb downstream 1.0kb downstream 2470 true Chr18: 12054107-12056576 Populus trichocarpa
Potri.018G091401 1.0kb downstream 1.0kb downstream 1000 false Chr18: 12054107-12055106 Populus trichocarpa
Potri.018G091401 2.0kb upstream 2.0kb upstream 3470 true Chr18: 12055107-12058576 Populus trichocarpa
Potri.018G091401 2.0kb upstream 2.0kb upstream 2000 false Chr18: 12056577-12058576 Populus trichocarpa
Potri.018G091401 2.0kb downstream 2.0kb downstream 3470 true Chr18: 12053107-12056576 Populus trichocarpa
Potri.018G091401 2.0kb downstream 2.0kb downstream 2000 false Chr18: 12053107-12055106 Populus trichocarpa
Potri.018G091401 5.0kb upstream 5.0kb upstream 6470 true Chr18: 12055107-12061576 Populus trichocarpa
Potri.018G091401 5.0kb upstream 5.0kb upstream 5000 false Chr18: 12056577-12061576 Populus trichocarpa
Potri.018G091401 5.0kb downstream 5.0kb downstream 6470 true Chr18: 12050107-12056576 Populus trichocarpa
Potri.018G091401 5.0kb downstream 5.0kb downstream 5000 false Chr18: 12050107-12055106 Populus trichocarpa
Potri.018G091401 10.0kb upstream 10.0kb upstream 11470 true Chr18: 12055107-12066576 Populus trichocarpa
Potri.018G091401 10.0kb upstream 10.0kb upstream 10000 false Chr18: 12056577-12066576 Populus trichocarpa
Potri.018G091401 10.0kb downstream 10.0kb downstream 11470 true Chr18: 12045107-12056576 Populus trichocarpa
Potri.018G091401 10.0kb downstream 10.0kb downstream 10000 false Chr18: 12045107-12055106 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455505 5262 Malpighiales View MSA
124246487 5268 Malvidae View MSA
124070505 5270 Rosid View MSA
123742387 5271 Pentapetalae View MSA
122795056 5272 Eudicot View MSA
122048264 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain