Gene : Potri.018G082900 P. trichocarpa v3.1

Defline:  (1 of 2) 1.1.1.35//4.2.1.17//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // 3-hydroxybutyryl-CoA epimerase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Genomic Order:  843
Name:  ? Potri.018G082900 Secondary Identifier:  ? PAC:37247252

Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ILEUDEG-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-5136 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5137 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5138 Populus trichocarpa pathologic  
Ptrichocarpa PWY-561 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6435 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6837 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7036 Populus trichocarpa pathologic  
Ptrichocarpa PWY-735 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7606 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7726 Populus trichocarpa pathologic  
Ptrichocarpa VALDEG-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G082900 0.5kb upstream 0.5kb upstream 7983 true Chr18: 10972032-10980014 Populus trichocarpa
Potri.018G082900 0.5kb upstream 0.5kb upstream 500 false Chr18: 10972032-10972531 Populus trichocarpa
Potri.018G082900 0.5kb downstream 0.5kb downstream 7983 true Chr18: 10972532-10980514 Populus trichocarpa
Potri.018G082900 0.5kb downstream 0.5kb downstream 500 false Chr18: 10980015-10980514 Populus trichocarpa
Potri.018G082900 1.0kb upstream 1.0kb upstream 8483 true Chr18: 10971532-10980014 Populus trichocarpa
Potri.018G082900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 10971532-10972531 Populus trichocarpa
Potri.018G082900 1.0kb downstream 1.0kb downstream 8483 true Chr18: 10972532-10981014 Populus trichocarpa
Potri.018G082900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 10980015-10981014 Populus trichocarpa
Potri.018G082900 2.0kb upstream 2.0kb upstream 9483 true Chr18: 10970532-10980014 Populus trichocarpa
Potri.018G082900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 10970532-10972531 Populus trichocarpa
Potri.018G082900 2.0kb downstream 2.0kb downstream 9483 true Chr18: 10972532-10982014 Populus trichocarpa
Potri.018G082900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 10980015-10982014 Populus trichocarpa
Potri.018G082900 5.0kb upstream 5.0kb upstream 12483 true Chr18: 10967532-10980014 Populus trichocarpa
Potri.018G082900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 10967532-10972531 Populus trichocarpa
Potri.018G082900 5.0kb downstream 5.0kb downstream 12483 true Chr18: 10972532-10985014 Populus trichocarpa
Potri.018G082900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 10980015-10985014 Populus trichocarpa
Potri.018G082900 10.0kb upstream 10.0kb upstream 17483 true Chr18: 10962532-10980014 Populus trichocarpa
Potri.018G082900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 10962532-10972531 Populus trichocarpa
Potri.018G082900 10.0kb downstream 10.0kb downstream 17483 true Chr18: 10972532-10990014 Populus trichocarpa
Potri.018G082900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 10980015-10990014 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451771 5262 Malpighiales View MSA
124241390 5268 Malvidae View MSA
124067540 5270 Rosid View MSA
123736586 5271 Pentapetalae View MSA
122787212 5272 Eudicot View MSA
122047578 5273 Angiosperm View MSA
121310763 5274 Embryophyte View MSA
123348170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain