Gene : Potri.018G086000 P. trichocarpa v3.1

Defline:  (1 of 3) K07151 - dolichyl-diphosphooligosaccharide--protein glycosyltransferase (STT3) Genomic Order:  875
Name:  ? Potri.018G086000 Secondary Identifier:  ? PAC:37248012

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G086000 0.5kb upstream 0.5kb upstream 15305 true Chr18: 11290221-11305525 Populus trichocarpa
Potri.018G086000 0.5kb upstream 0.5kb upstream 500 false Chr18: 11305026-11305525 Populus trichocarpa
Potri.018G086000 0.5kb downstream 0.5kb downstream 15305 true Chr18: 11289721-11305025 Populus trichocarpa
Potri.018G086000 0.5kb downstream 0.5kb downstream 500 false Chr18: 11289721-11290220 Populus trichocarpa
Potri.018G086000 1.0kb upstream 1.0kb upstream 15805 true Chr18: 11290221-11306025 Populus trichocarpa
Potri.018G086000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 11305026-11306025 Populus trichocarpa
Potri.018G086000 1.0kb downstream 1.0kb downstream 15805 true Chr18: 11289221-11305025 Populus trichocarpa
Potri.018G086000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 11289221-11290220 Populus trichocarpa
Potri.018G086000 2.0kb upstream 2.0kb upstream 16805 true Chr18: 11290221-11307025 Populus trichocarpa
Potri.018G086000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 11305026-11307025 Populus trichocarpa
Potri.018G086000 2.0kb downstream 2.0kb downstream 16805 true Chr18: 11288221-11305025 Populus trichocarpa
Potri.018G086000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 11288221-11290220 Populus trichocarpa
Potri.018G086000 5.0kb upstream 5.0kb upstream 19805 true Chr18: 11290221-11310025 Populus trichocarpa
Potri.018G086000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 11305026-11310025 Populus trichocarpa
Potri.018G086000 5.0kb downstream 5.0kb downstream 19805 true Chr18: 11285221-11305025 Populus trichocarpa
Potri.018G086000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 11285221-11290220 Populus trichocarpa
Potri.018G086000 10.0kb upstream 10.0kb upstream 24805 true Chr18: 11290221-11315025 Populus trichocarpa
Potri.018G086000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 11305026-11315025 Populus trichocarpa
Potri.018G086000 10.0kb downstream 10.0kb downstream 24805 true Chr18: 11280221-11305025 Populus trichocarpa
Potri.018G086000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 11280221-11290220 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041451 5273 Angiosperm View MSA
122451534 5262 Malpighiales View MSA
124237248 5268 Malvidae View MSA
124062338 5270 Rosid View MSA
123739535 5271 Pentapetalae View MSA
122792930 5272 Eudicot View MSA
121345608 5274 Embryophyte View MSA
123425256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain