Gene : Potri.019G028300 P. trichocarpa v3.1

Defline:  (1 of 5) K02715 - PsbN protein (psbN) Genomic Order:  294
Name:  ? Potri.019G028300 Secondary Identifier:  ? PAC:37260139

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G028300 0.5kb upstream 0.5kb upstream 669 true Chr19: 3196922-3197590 Populus trichocarpa
Potri.019G028300 0.5kb upstream 0.5kb upstream 500 false Chr19: 3196922-3197421 Populus trichocarpa
Potri.019G028300 0.5kb downstream 0.5kb downstream 669 true Chr19: 3197422-3198090 Populus trichocarpa
Potri.019G028300 0.5kb downstream 0.5kb downstream 500 false Chr19: 3197591-3198090 Populus trichocarpa
Potri.019G028300 1.0kb upstream 1.0kb upstream 1169 true Chr19: 3196422-3197590 Populus trichocarpa
Potri.019G028300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 3196422-3197421 Populus trichocarpa
Potri.019G028300 1.0kb downstream 1.0kb downstream 1169 true Chr19: 3197422-3198590 Populus trichocarpa
Potri.019G028300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 3197591-3198590 Populus trichocarpa
Potri.019G028300 2.0kb upstream 2.0kb upstream 2169 true Chr19: 3195422-3197590 Populus trichocarpa
Potri.019G028300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 3195422-3197421 Populus trichocarpa
Potri.019G028300 2.0kb downstream 2.0kb downstream 2169 true Chr19: 3197422-3199590 Populus trichocarpa
Potri.019G028300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 3197591-3199590 Populus trichocarpa
Potri.019G028300 5.0kb upstream 5.0kb upstream 5169 true Chr19: 3192422-3197590 Populus trichocarpa
Potri.019G028300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 3192422-3197421 Populus trichocarpa
Potri.019G028300 5.0kb downstream 5.0kb downstream 5169 true Chr19: 3197422-3202590 Populus trichocarpa
Potri.019G028300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 3197591-3202590 Populus trichocarpa
Potri.019G028300 10.0kb upstream 10.0kb upstream 10169 true Chr19: 3187422-3197590 Populus trichocarpa
Potri.019G028300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 3187422-3197421 Populus trichocarpa
Potri.019G028300 10.0kb downstream 10.0kb downstream 10169 true Chr19: 3197422-3207590 Populus trichocarpa
Potri.019G028300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 3197591-3207590 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028384 5273 Angiosperm View MSA
122397731 5262 Malpighiales Singleton cluster - no MSA
124248118 5268 Malvidae View MSA
124070041 5270 Rosid View MSA
123742252 5271 Pentapetalae View MSA
122796996 5272 Eudicot View MSA
121350730 5274 Embryophyte View MSA
123381861 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain