Gene : Potri.019G028500 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR10031:SF6 - ATP SYNTHASE SUBUNIT C, CHLOROPLASTIC Genomic Order:  297
Name:  ? Potri.019G028500 Secondary Identifier:  ? PAC:37260330
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6126 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7219 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7229 Populus trichocarpa pathologic  
Ptrichocarpa PWY-841 Populus trichocarpa pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G028500 0.5kb upstream 0.5kb upstream 1589 true Chr19: 3201672-3203260 Populus trichocarpa
Potri.019G028500 0.5kb upstream 0.5kb upstream 500 false Chr19: 3202761-3203260 Populus trichocarpa
Potri.019G028500 0.5kb downstream 0.5kb downstream 1589 true Chr19: 3201172-3202760 Populus trichocarpa
Potri.019G028500 0.5kb downstream 0.5kb downstream 500 false Chr19: 3201172-3201671 Populus trichocarpa
Potri.019G028500 1.0kb upstream 1.0kb upstream 2089 true Chr19: 3201672-3203760 Populus trichocarpa
Potri.019G028500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 3202761-3203760 Populus trichocarpa
Potri.019G028500 1.0kb downstream 1.0kb downstream 2089 true Chr19: 3200672-3202760 Populus trichocarpa
Potri.019G028500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 3200672-3201671 Populus trichocarpa
Potri.019G028500 2.0kb upstream 2.0kb upstream 3089 true Chr19: 3201672-3204760 Populus trichocarpa
Potri.019G028500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 3202761-3204760 Populus trichocarpa
Potri.019G028500 2.0kb downstream 2.0kb downstream 3089 true Chr19: 3199672-3202760 Populus trichocarpa
Potri.019G028500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 3199672-3201671 Populus trichocarpa
Potri.019G028500 5.0kb upstream 5.0kb upstream 6089 true Chr19: 3201672-3207760 Populus trichocarpa
Potri.019G028500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 3202761-3207760 Populus trichocarpa
Potri.019G028500 5.0kb downstream 5.0kb downstream 6089 true Chr19: 3196672-3202760 Populus trichocarpa
Potri.019G028500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 3196672-3201671 Populus trichocarpa
Potri.019G028500 10.0kb upstream 10.0kb upstream 11089 true Chr19: 3201672-3212760 Populus trichocarpa
Potri.019G028500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 3202761-3212760 Populus trichocarpa
Potri.019G028500 10.0kb downstream 10.0kb downstream 11089 true Chr19: 3191672-3202760 Populus trichocarpa
Potri.019G028500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 3191672-3201671 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028907 5273 Angiosperm View MSA
122448352 5262 Malpighiales View MSA
124248078 5268 Malvidae View MSA
124073971 5270 Rosid View MSA
123751411 5271 Pentapetalae View MSA
122797516 5272 Eudicot View MSA
121351324 5274 Embryophyte View MSA
123428045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain