Gene : Potri.019G013500 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR33149:SF4 - PHOTOSYSTEM Q(B) PROTEIN Genomic Order:  137
Name:  ? Potri.019G013500 Secondary Identifier:  ? PAC:37261817
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-101 Populus trichocarpa pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G013500 0.5kb upstream 0.5kb upstream 950 true Chr19: 1518149-1519098 Populus trichocarpa
Potri.019G013500 0.5kb upstream 0.5kb upstream 500 false Chr19: 1518599-1519098 Populus trichocarpa
Potri.019G013500 0.5kb downstream 0.5kb downstream 950 true Chr19: 1517649-1518598 Populus trichocarpa
Potri.019G013500 0.5kb downstream 0.5kb downstream 500 false Chr19: 1517649-1518148 Populus trichocarpa
Potri.019G013500 1.0kb upstream 1.0kb upstream 1450 true Chr19: 1518149-1519598 Populus trichocarpa
Potri.019G013500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 1518599-1519598 Populus trichocarpa
Potri.019G013500 1.0kb downstream 1.0kb downstream 1450 true Chr19: 1517149-1518598 Populus trichocarpa
Potri.019G013500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 1517149-1518148 Populus trichocarpa
Potri.019G013500 2.0kb upstream 2.0kb upstream 2450 true Chr19: 1518149-1520598 Populus trichocarpa
Potri.019G013500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 1518599-1520598 Populus trichocarpa
Potri.019G013500 2.0kb downstream 2.0kb downstream 2450 true Chr19: 1516149-1518598 Populus trichocarpa
Potri.019G013500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 1516149-1518148 Populus trichocarpa
Potri.019G013500 5.0kb upstream 5.0kb upstream 5450 true Chr19: 1518149-1523598 Populus trichocarpa
Potri.019G013500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 1518599-1523598 Populus trichocarpa
Potri.019G013500 5.0kb downstream 5.0kb downstream 5450 true Chr19: 1513149-1518598 Populus trichocarpa
Potri.019G013500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 1513149-1518148 Populus trichocarpa
Potri.019G013500 10.0kb upstream 10.0kb upstream 10450 true Chr19: 1518149-1528598 Populus trichocarpa
Potri.019G013500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 1518599-1528598 Populus trichocarpa
Potri.019G013500 10.0kb downstream 10.0kb downstream 10450 true Chr19: 1508149-1518598 Populus trichocarpa
Potri.019G013500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 1508149-1518148 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122397504 5262 Malpighiales Singleton cluster - no MSA
124254478 5268 Malvidae View MSA
124040377 5270 Rosid View MSA
123751275 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain