Gene : Potri.018G145600 P. trichocarpa v3.1

Defline:  (1 of 1) PTHR11751//PTHR11751:SF435 - SUBGROUP I AMINOTRANSFERASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  1495
Name:  ? Potri.018G145600 Secondary Identifier:  ? PAC:37246489

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa POLYAMINSYN3-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-43 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G145600 0.5kb upstream 0.5kb upstream 4473 true Chr18: 16500434-16504906 Populus trichocarpa
Potri.018G145600 0.5kb upstream 0.5kb upstream 500 false Chr18: 16504407-16504906 Populus trichocarpa
Potri.018G145600 0.5kb downstream 0.5kb downstream 4473 true Chr18: 16499934-16504406 Populus trichocarpa
Potri.018G145600 0.5kb downstream 0.5kb downstream 500 false Chr18: 16499934-16500433 Populus trichocarpa
Potri.018G145600 1.0kb upstream 1.0kb upstream 4973 true Chr18: 16500434-16505406 Populus trichocarpa
Potri.018G145600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 16504407-16505406 Populus trichocarpa
Potri.018G145600 1.0kb downstream 1.0kb downstream 4973 true Chr18: 16499434-16504406 Populus trichocarpa
Potri.018G145600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 16499434-16500433 Populus trichocarpa
Potri.018G145600 2.0kb upstream 2.0kb upstream 5973 true Chr18: 16500434-16506406 Populus trichocarpa
Potri.018G145600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 16504407-16506406 Populus trichocarpa
Potri.018G145600 2.0kb downstream 2.0kb downstream 5973 true Chr18: 16498434-16504406 Populus trichocarpa
Potri.018G145600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 16498434-16500433 Populus trichocarpa
Potri.018G145600 5.0kb upstream 5.0kb upstream 8973 true Chr18: 16500434-16509406 Populus trichocarpa
Potri.018G145600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 16504407-16509406 Populus trichocarpa
Potri.018G145600 5.0kb downstream 5.0kb downstream 8973 true Chr18: 16495434-16504406 Populus trichocarpa
Potri.018G145600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 16495434-16500433 Populus trichocarpa
Potri.018G145600 10.0kb upstream 10.0kb upstream 13973 true Chr18: 16500434-16514406 Populus trichocarpa
Potri.018G145600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 16504407-16514406 Populus trichocarpa
Potri.018G145600 10.0kb downstream 10.0kb downstream 13973 true Chr18: 16490434-16504406 Populus trichocarpa
Potri.018G145600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 16490434-16500433 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458681 5262 Malpighiales View MSA
124248348 5268 Malvidae View MSA
124050697 5270 Rosid View MSA
123742620 5271 Pentapetalae View MSA
122796978 5272 Eudicot View MSA
122048497 5273 Angiosperm View MSA
121348486 5274 Embryophyte View MSA
123425712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain