Gene : Potri.018G150100 P. trichocarpa v3.1

Defline:  (1 of 2) K02961 - small subunit ribosomal protein S17 (RP-S17, MRPS17, rpsQ) Genomic Order:  1544
Name:  ? Potri.018G150100 Secondary Identifier:  ? PAC:37247441

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G150100 0.5kb upstream 0.5kb upstream 2148 true Chr18: 16810777-16812924 Populus trichocarpa
Potri.018G150100 0.5kb upstream 0.5kb upstream 500 false Chr18: 16810777-16811276 Populus trichocarpa
Potri.018G150100 0.5kb downstream 0.5kb downstream 2148 true Chr18: 16811277-16813424 Populus trichocarpa
Potri.018G150100 0.5kb downstream 0.5kb downstream 500 false Chr18: 16812925-16813424 Populus trichocarpa
Potri.018G150100 1.0kb upstream 1.0kb upstream 2648 true Chr18: 16810277-16812924 Populus trichocarpa
Potri.018G150100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 16810277-16811276 Populus trichocarpa
Potri.018G150100 1.0kb downstream 1.0kb downstream 2648 true Chr18: 16811277-16813924 Populus trichocarpa
Potri.018G150100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 16812925-16813924 Populus trichocarpa
Potri.018G150100 2.0kb upstream 2.0kb upstream 3648 true Chr18: 16809277-16812924 Populus trichocarpa
Potri.018G150100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 16809277-16811276 Populus trichocarpa
Potri.018G150100 2.0kb downstream 2.0kb downstream 3648 true Chr18: 16811277-16814924 Populus trichocarpa
Potri.018G150100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 16812925-16814924 Populus trichocarpa
Potri.018G150100 5.0kb upstream 5.0kb upstream 6648 true Chr18: 16806277-16812924 Populus trichocarpa
Potri.018G150100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 16806277-16811276 Populus trichocarpa
Potri.018G150100 5.0kb downstream 5.0kb downstream 6648 true Chr18: 16811277-16817924 Populus trichocarpa
Potri.018G150100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 16812925-16817924 Populus trichocarpa
Potri.018G150100 10.0kb upstream 10.0kb upstream 11648 true Chr18: 16801277-16812924 Populus trichocarpa
Potri.018G150100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 16801277-16811276 Populus trichocarpa
Potri.018G150100 10.0kb downstream 10.0kb downstream 11648 true Chr18: 16811277-16822924 Populus trichocarpa
Potri.018G150100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 16812925-16822924 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122431667 5262 Malpighiales View MSA
124242135 5268 Malvidae View MSA
124063542 5270 Rosid View MSA
123744369 5271 Pentapetalae View MSA
122786157 5272 Eudicot View MSA
122045320 5273 Angiosperm View MSA
121347348 5274 Embryophyte View MSA
123424165 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain