Gene : Potri.018G141900 P. trichocarpa v3.1

Defline:  (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) Genomic Order:  1455
Name:  ? Potri.018G141900 Secondary Identifier:  ? PAC:37248528

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G141900 0.5kb upstream 0.5kb upstream 12105 true Chr18: 16196280-16208384 Populus trichocarpa
Potri.018G141900 0.5kb upstream 0.5kb upstream 500 false Chr18: 16207885-16208384 Populus trichocarpa
Potri.018G141900 0.5kb downstream 0.5kb downstream 12105 true Chr18: 16195780-16207884 Populus trichocarpa
Potri.018G141900 0.5kb downstream 0.5kb downstream 500 false Chr18: 16195780-16196279 Populus trichocarpa
Potri.018G141900 1.0kb upstream 1.0kb upstream 12605 true Chr18: 16196280-16208884 Populus trichocarpa
Potri.018G141900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 16207885-16208884 Populus trichocarpa
Potri.018G141900 1.0kb downstream 1.0kb downstream 12605 true Chr18: 16195280-16207884 Populus trichocarpa
Potri.018G141900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 16195280-16196279 Populus trichocarpa
Potri.018G141900 2.0kb upstream 2.0kb upstream 13605 true Chr18: 16196280-16209884 Populus trichocarpa
Potri.018G141900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 16207885-16209884 Populus trichocarpa
Potri.018G141900 2.0kb downstream 2.0kb downstream 13605 true Chr18: 16194280-16207884 Populus trichocarpa
Potri.018G141900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 16194280-16196279 Populus trichocarpa
Potri.018G141900 5.0kb upstream 5.0kb upstream 16605 true Chr18: 16196280-16212884 Populus trichocarpa
Potri.018G141900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 16207885-16212884 Populus trichocarpa
Potri.018G141900 5.0kb downstream 5.0kb downstream 16605 true Chr18: 16191280-16207884 Populus trichocarpa
Potri.018G141900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 16191280-16196279 Populus trichocarpa
Potri.018G141900 10.0kb upstream 10.0kb upstream 21605 true Chr18: 16196280-16217884 Populus trichocarpa
Potri.018G141900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 16207885-16217884 Populus trichocarpa
Potri.018G141900 10.0kb downstream 10.0kb downstream 21605 true Chr18: 16186280-16207884 Populus trichocarpa
Potri.018G141900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 16186280-16196279 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460759 5262 Malpighiales View MSA
124252693 5268 Malvidae View MSA
124066259 5270 Rosid View MSA
123748643 5271 Pentapetalae View MSA
122787045 5272 Eudicot View MSA
122045949 5273 Angiosperm View MSA
121346093 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain