Gene : Potri.T144400 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR33284:SF1 - RIBOSOMAL L25/TL5/CTC N-TERMINAL 5S RRNA BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  2
Name:  ? Potri.T144400 Secondary Identifier:  ? PAC:37241741
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T144400 0.5kb upstream 0.5kb upstream 4340 true scaffold_407: 24765-29104 Populus trichocarpa
Potri.T144400 0.5kb upstream 0.5kb upstream 500 false scaffold_407: 28605-29104 Populus trichocarpa
Potri.T144400 0.5kb downstream 0.5kb downstream 4340 true scaffold_407: 24265-28604 Populus trichocarpa
Potri.T144400 0.5kb downstream 0.5kb downstream 500 false scaffold_407: 24265-24764 Populus trichocarpa
Potri.T144400 1.0kb upstream 1.0kb upstream 4840 true scaffold_407: 24765-29604 Populus trichocarpa
Potri.T144400 1.0kb upstream 1.0kb upstream 1000 false scaffold_407: 28605-29604 Populus trichocarpa
Potri.T144400 1.0kb downstream 1.0kb downstream 4840 true scaffold_407: 23765-28604 Populus trichocarpa
Potri.T144400 1.0kb downstream 1.0kb downstream 1000 false scaffold_407: 23765-24764 Populus trichocarpa
Potri.T144400 2.0kb upstream 2.0kb upstream 5840 true scaffold_407: 24765-30604 Populus trichocarpa
Potri.T144400 2.0kb upstream 2.0kb upstream 2000 false scaffold_407: 28605-30604 Populus trichocarpa
Potri.T144400 2.0kb downstream 2.0kb downstream 5840 true scaffold_407: 22765-28604 Populus trichocarpa
Potri.T144400 2.0kb downstream 2.0kb downstream 2000 false scaffold_407: 22765-24764 Populus trichocarpa
Potri.T144400 5.0kb upstream 5.0kb upstream 8840 true scaffold_407: 24765-33604 Populus trichocarpa
Potri.T144400 5.0kb upstream 5.0kb upstream 5000 false scaffold_407: 28605-33604 Populus trichocarpa
Potri.T144400 5.0kb downstream 5.0kb downstream 8840 true scaffold_407: 19765-28604 Populus trichocarpa
Potri.T144400 5.0kb downstream 5.0kb downstream 5000 false scaffold_407: 19765-24764 Populus trichocarpa
Potri.T144400 10.0kb upstream 10.0kb upstream 11524 true scaffold_407: 24765-36288 Populus trichocarpa
Potri.T144400 10.0kb upstream 10.0kb upstream 7684 false scaffold_407: 28605-36288 Populus trichocarpa
Potri.T144400 10.0kb downstream 10.0kb downstream 13840 true scaffold_407: 14765-28604 Populus trichocarpa
Potri.T144400 10.0kb downstream 10.0kb downstream 10000 false scaffold_407: 14765-24764 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452562 5262 Malpighiales View MSA
124240980 5268 Malvidae View MSA
124062283 5270 Rosid View MSA
123743591 5271 Pentapetalae View MSA
122793831 5272 Eudicot View MSA
122044337 5273 Angiosperm View MSA
121344036 5274 Embryophyte View MSA
123426023 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain