Gene : Potri.019G087400 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR12161:SF21 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  900
Name:  ? Potri.019G087400 Secondary Identifier:  ? PAC:37260780
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G087400 0.5kb upstream 0.5kb upstream 6750 true Chr19: 11925594-11932343 Populus trichocarpa
Potri.019G087400 0.5kb upstream 0.5kb upstream 500 false Chr19: 11925594-11926093 Populus trichocarpa
Potri.019G087400 0.5kb downstream 0.5kb downstream 6750 true Chr19: 11926094-11932843 Populus trichocarpa
Potri.019G087400 0.5kb downstream 0.5kb downstream 500 false Chr19: 11932344-11932843 Populus trichocarpa
Potri.019G087400 1.0kb upstream 1.0kb upstream 7250 true Chr19: 11925094-11932343 Populus trichocarpa
Potri.019G087400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 11925094-11926093 Populus trichocarpa
Potri.019G087400 1.0kb downstream 1.0kb downstream 7250 true Chr19: 11926094-11933343 Populus trichocarpa
Potri.019G087400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 11932344-11933343 Populus trichocarpa
Potri.019G087400 2.0kb upstream 2.0kb upstream 8250 true Chr19: 11924094-11932343 Populus trichocarpa
Potri.019G087400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 11924094-11926093 Populus trichocarpa
Potri.019G087400 2.0kb downstream 2.0kb downstream 8250 true Chr19: 11926094-11934343 Populus trichocarpa
Potri.019G087400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 11932344-11934343 Populus trichocarpa
Potri.019G087400 5.0kb upstream 5.0kb upstream 11250 true Chr19: 11921094-11932343 Populus trichocarpa
Potri.019G087400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 11921094-11926093 Populus trichocarpa
Potri.019G087400 5.0kb downstream 5.0kb downstream 11250 true Chr19: 11926094-11937343 Populus trichocarpa
Potri.019G087400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 11932344-11937343 Populus trichocarpa
Potri.019G087400 10.0kb upstream 10.0kb upstream 16250 true Chr19: 11916094-11932343 Populus trichocarpa
Potri.019G087400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 11916094-11926093 Populus trichocarpa
Potri.019G087400 10.0kb downstream 10.0kb downstream 16250 true Chr19: 11926094-11942343 Populus trichocarpa
Potri.019G087400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 11932344-11942343 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122401162 5262 Malpighiales View MSA
124245103 5268 Malvidae View MSA
124068076 5270 Rosid View MSA
123736868 5271 Pentapetalae View MSA
122789571 5272 Eudicot View MSA
122045314 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain