Gene : Potri.019G047900 P. trichocarpa v3.1

Defline:  (1 of 6) PF03372//PF14111//PF14392 - Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) // Domain of unknown function (DUF4283) (DUF4283) // Zinc knuckle (zf-CCHC_4) Genomic Order:  490
Name:  ? Potri.019G047900 Secondary Identifier:  ? PAC:37261035

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G047900 0.5kb upstream 0.5kb upstream 3253 true Chr19: 6846408-6849660 Populus trichocarpa
Potri.019G047900 0.5kb upstream 0.5kb upstream 500 false Chr19: 6849161-6849660 Populus trichocarpa
Potri.019G047900 0.5kb downstream 0.5kb downstream 3253 true Chr19: 6845908-6849160 Populus trichocarpa
Potri.019G047900 0.5kb downstream 0.5kb downstream 500 false Chr19: 6845908-6846407 Populus trichocarpa
Potri.019G047900 1.0kb upstream 1.0kb upstream 3753 true Chr19: 6846408-6850160 Populus trichocarpa
Potri.019G047900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 6849161-6850160 Populus trichocarpa
Potri.019G047900 1.0kb downstream 1.0kb downstream 3753 true Chr19: 6845408-6849160 Populus trichocarpa
Potri.019G047900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 6845408-6846407 Populus trichocarpa
Potri.019G047900 2.0kb upstream 2.0kb upstream 4753 true Chr19: 6846408-6851160 Populus trichocarpa
Potri.019G047900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 6849161-6851160 Populus trichocarpa
Potri.019G047900 2.0kb downstream 2.0kb downstream 4753 true Chr19: 6844408-6849160 Populus trichocarpa
Potri.019G047900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 6844408-6846407 Populus trichocarpa
Potri.019G047900 5.0kb upstream 5.0kb upstream 7753 true Chr19: 6846408-6854160 Populus trichocarpa
Potri.019G047900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 6849161-6854160 Populus trichocarpa
Potri.019G047900 5.0kb downstream 5.0kb downstream 7753 true Chr19: 6841408-6849160 Populus trichocarpa
Potri.019G047900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 6841408-6846407 Populus trichocarpa
Potri.019G047900 10.0kb upstream 10.0kb upstream 12753 true Chr19: 6846408-6859160 Populus trichocarpa
Potri.019G047900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 6849161-6859160 Populus trichocarpa
Potri.019G047900 10.0kb downstream 10.0kb downstream 12753 true Chr19: 6836408-6849160 Populus trichocarpa
Potri.019G047900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 6836408-6846407 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122406093 5262 Malpighiales View MSA
124252780 5268 Malvidae View MSA
124051495 5270 Rosid View MSA
123753554 5271 Pentapetalae View MSA
122797941 5272 Eudicot View MSA
122051690 5273 Angiosperm View MSA
121351675 5274 Embryophyte View MSA
123428354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain