Gene : Potri.019G034900 P. trichocarpa v3.1

Defline:  (1 of 2) K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) Genomic Order:  361
Name:  ? Potri.019G034900 Secondary Identifier:  ? PAC:37261828

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G034900 0.5kb upstream 0.5kb upstream 2691 true Chr19: 3949211-3951901 Populus trichocarpa
Potri.019G034900 0.5kb upstream 0.5kb upstream 500 false Chr19: 3949211-3949710 Populus trichocarpa
Potri.019G034900 0.5kb downstream 0.5kb downstream 2691 true Chr19: 3949711-3952401 Populus trichocarpa
Potri.019G034900 0.5kb downstream 0.5kb downstream 500 false Chr19: 3951902-3952401 Populus trichocarpa
Potri.019G034900 1.0kb upstream 1.0kb upstream 3191 true Chr19: 3948711-3951901 Populus trichocarpa
Potri.019G034900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 3948711-3949710 Populus trichocarpa
Potri.019G034900 1.0kb downstream 1.0kb downstream 3191 true Chr19: 3949711-3952901 Populus trichocarpa
Potri.019G034900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 3951902-3952901 Populus trichocarpa
Potri.019G034900 2.0kb upstream 2.0kb upstream 4191 true Chr19: 3947711-3951901 Populus trichocarpa
Potri.019G034900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 3947711-3949710 Populus trichocarpa
Potri.019G034900 2.0kb downstream 2.0kb downstream 4191 true Chr19: 3949711-3953901 Populus trichocarpa
Potri.019G034900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 3951902-3953901 Populus trichocarpa
Potri.019G034900 5.0kb upstream 5.0kb upstream 7191 true Chr19: 3944711-3951901 Populus trichocarpa
Potri.019G034900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 3944711-3949710 Populus trichocarpa
Potri.019G034900 5.0kb downstream 5.0kb downstream 7191 true Chr19: 3949711-3956901 Populus trichocarpa
Potri.019G034900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 3951902-3956901 Populus trichocarpa
Potri.019G034900 10.0kb upstream 10.0kb upstream 12191 true Chr19: 3939711-3951901 Populus trichocarpa
Potri.019G034900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 3939711-3949710 Populus trichocarpa
Potri.019G034900 10.0kb downstream 10.0kb downstream 12191 true Chr19: 3949711-3961901 Populus trichocarpa
Potri.019G034900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 3951902-3961901 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458005 5262 Malpighiales View MSA
124238669 5268 Malvidae View MSA
124060863 5270 Rosid View MSA
123746440 5271 Pentapetalae View MSA
122789002 5272 Eudicot View MSA
122045887 5273 Angiosperm View MSA
121346687 5274 Embryophyte View MSA
123425060 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain