Gene : Potri.T092400 P. trichocarpa v3.1
Defline:  (1 of 3) PTHR11954:SF25 - LS1-LIKE PROTEIN Genomic Order:  9
Name:  ? Potri.T092400 Secondary Identifier:  ? PAC:37255837
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6498 Populus trichocarpa pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T092400 0.5kb upstream 0.5kb upstream 1492 true scaffold_119: 96718-98209 Populus trichocarpa
Potri.T092400 0.5kb upstream 0.5kb upstream 500 false scaffold_119: 97710-98209 Populus trichocarpa
Potri.T092400 0.5kb downstream 0.5kb downstream 1492 true scaffold_119: 96218-97709 Populus trichocarpa
Potri.T092400 0.5kb downstream 0.5kb downstream 500 false scaffold_119: 96218-96717 Populus trichocarpa
Potri.T092400 1.0kb upstream 1.0kb upstream 1891 true scaffold_119: 96718-98608 Populus trichocarpa
Potri.T092400 1.0kb upstream 1.0kb upstream 899 false scaffold_119: 97710-98608 Populus trichocarpa
Potri.T092400 1.0kb downstream 1.0kb downstream 1992 true scaffold_119: 95718-97709 Populus trichocarpa
Potri.T092400 1.0kb downstream 1.0kb downstream 1000 false scaffold_119: 95718-96717 Populus trichocarpa
Potri.T092400 2.0kb upstream 2.0kb upstream 1891 true scaffold_119: 96718-98608 Populus trichocarpa
Potri.T092400 2.0kb upstream 2.0kb upstream 899 false scaffold_119: 97710-98608 Populus trichocarpa
Potri.T092400 2.0kb downstream 2.0kb downstream 2992 true scaffold_119: 94718-97709 Populus trichocarpa
Potri.T092400 2.0kb downstream 2.0kb downstream 2000 false scaffold_119: 94718-96717 Populus trichocarpa
Potri.T092400 5.0kb upstream 5.0kb upstream 1891 true scaffold_119: 96718-98608 Populus trichocarpa
Potri.T092400 5.0kb upstream 5.0kb upstream 899 false scaffold_119: 97710-98608 Populus trichocarpa
Potri.T092400 5.0kb downstream 5.0kb downstream 5992 true scaffold_119: 91718-97709 Populus trichocarpa
Potri.T092400 5.0kb downstream 5.0kb downstream 5000 false scaffold_119: 91718-96717 Populus trichocarpa
Potri.T092400 10.0kb upstream 10.0kb upstream 1891 true scaffold_119: 96718-98608 Populus trichocarpa
Potri.T092400 10.0kb upstream 10.0kb upstream 899 false scaffold_119: 97710-98608 Populus trichocarpa
Potri.T092400 10.0kb downstream 10.0kb downstream 10992 true scaffold_119: 86718-97709 Populus trichocarpa
Potri.T092400 10.0kb downstream 10.0kb downstream 10000 false scaffold_119: 86718-96717 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121579346 5273 Angiosperm View MSA
122426586 5262 Malpighiales View MSA
124249677 5268 Malvidae View MSA
123952401 5270 Rosid View MSA
123530204 5271 Pentapetalae View MSA
122565174 5272 Eudicot View MSA
120851810 5274 Embryophyte View MSA
122892976 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain