Gene : Potri.T133600 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR22763:SF46 - PROTEIN SAN1 Genomic Order:  2
Name:  ? Potri.T133600 Secondary Identifier:  ? PAC:37235114
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T133600 0.5kb upstream 0.5kb upstream 894 true scaffold_270: 1424-2317 Populus trichocarpa
Potri.T133600 0.5kb upstream 0.5kb upstream 500 false scaffold_270: 1818-2317 Populus trichocarpa
Potri.T133600 0.5kb downstream 0.5kb downstream 894 true scaffold_270: 924-1817 Populus trichocarpa
Potri.T133600 0.5kb downstream 0.5kb downstream 500 false scaffold_270: 924-1423 Populus trichocarpa
Potri.T133600 1.0kb upstream 1.0kb upstream 1394 true scaffold_270: 1424-2817 Populus trichocarpa
Potri.T133600 1.0kb upstream 1.0kb upstream 1000 false scaffold_270: 1818-2817 Populus trichocarpa
Potri.T133600 1.0kb downstream 1.0kb downstream 1394 true scaffold_270: 424-1817 Populus trichocarpa
Potri.T133600 1.0kb downstream 1.0kb downstream 1000 false scaffold_270: 424-1423 Populus trichocarpa
Potri.T133600 2.0kb upstream 2.0kb upstream 2394 true scaffold_270: 1424-3817 Populus trichocarpa
Potri.T133600 2.0kb upstream 2.0kb upstream 2000 false scaffold_270: 1818-3817 Populus trichocarpa
Potri.T133600 2.0kb downstream 2.0kb downstream 1817 true scaffold_270: 1-1817 Populus trichocarpa
Potri.T133600 2.0kb downstream 2.0kb downstream 1423 false scaffold_270: 1-1423 Populus trichocarpa
Potri.T133600 5.0kb upstream 5.0kb upstream 5394 true scaffold_270: 1424-6817 Populus trichocarpa
Potri.T133600 5.0kb upstream 5.0kb upstream 5000 false scaffold_270: 1818-6817 Populus trichocarpa
Potri.T133600 5.0kb downstream 5.0kb downstream 1817 true scaffold_270: 1-1817 Populus trichocarpa
Potri.T133600 5.0kb downstream 5.0kb downstream 1423 false scaffold_270: 1-1423 Populus trichocarpa
Potri.T133600 10.0kb upstream 10.0kb upstream 10394 true scaffold_270: 1424-11817 Populus trichocarpa
Potri.T133600 10.0kb upstream 10.0kb upstream 10000 false scaffold_270: 1818-11817 Populus trichocarpa
Potri.T133600 10.0kb downstream 10.0kb downstream 1817 true scaffold_270: 1-1817 Populus trichocarpa
Potri.T133600 10.0kb downstream 10.0kb downstream 1423 false scaffold_270: 1-1423 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122399954 5262 Malpighiales View MSA
124250573 5268 Malvidae View MSA
124074559 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain