Gene : Potri.T079500 P. trichocarpa v3.1
Defline:  (1 of 6) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Genomic Order:  4
Name:  ? Potri.T079500 Secondary Identifier:  ? PAC:37269628
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5466 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6824 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T079500 0.5kb upstream 0.5kb upstream 2965 true scaffold_87: 39187-42151 Populus trichocarpa
Potri.T079500 0.5kb upstream 0.5kb upstream 500 false scaffold_87: 41652-42151 Populus trichocarpa
Potri.T079500 0.5kb downstream 0.5kb downstream 2965 true scaffold_87: 38687-41651 Populus trichocarpa
Potri.T079500 0.5kb downstream 0.5kb downstream 500 false scaffold_87: 38687-39186 Populus trichocarpa
Potri.T079500 1.0kb upstream 1.0kb upstream 3465 true scaffold_87: 39187-42651 Populus trichocarpa
Potri.T079500 1.0kb upstream 1.0kb upstream 1000 false scaffold_87: 41652-42651 Populus trichocarpa
Potri.T079500 1.0kb downstream 1.0kb downstream 3465 true scaffold_87: 38187-41651 Populus trichocarpa
Potri.T079500 1.0kb downstream 1.0kb downstream 1000 false scaffold_87: 38187-39186 Populus trichocarpa
Potri.T079500 2.0kb upstream 2.0kb upstream 4465 true scaffold_87: 39187-43651 Populus trichocarpa
Potri.T079500 2.0kb upstream 2.0kb upstream 2000 false scaffold_87: 41652-43651 Populus trichocarpa
Potri.T079500 2.0kb downstream 2.0kb downstream 4465 true scaffold_87: 37187-41651 Populus trichocarpa
Potri.T079500 2.0kb downstream 2.0kb downstream 2000 false scaffold_87: 37187-39186 Populus trichocarpa
Potri.T079500 5.0kb upstream 5.0kb upstream 7465 true scaffold_87: 39187-46651 Populus trichocarpa
Potri.T079500 5.0kb upstream 5.0kb upstream 5000 false scaffold_87: 41652-46651 Populus trichocarpa
Potri.T079500 5.0kb downstream 5.0kb downstream 7465 true scaffold_87: 34187-41651 Populus trichocarpa
Potri.T079500 5.0kb downstream 5.0kb downstream 5000 false scaffold_87: 34187-39186 Populus trichocarpa
Potri.T079500 10.0kb upstream 10.0kb upstream 12465 true scaffold_87: 39187-51651 Populus trichocarpa
Potri.T079500 10.0kb upstream 10.0kb upstream 10000 false scaffold_87: 41652-51651 Populus trichocarpa
Potri.T079500 10.0kb downstream 10.0kb downstream 12465 true scaffold_87: 29187-41651 Populus trichocarpa
Potri.T079500 10.0kb downstream 10.0kb downstream 10000 false scaffold_87: 29187-39186 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452818 5262 Malpighiales View MSA
124254383 5268 Malvidae View MSA
124065870 5270 Rosid View MSA
123745907 5271 Pentapetalae View MSA
122793198 5272 Eudicot View MSA
122046121 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain