Gene : Potri.T160100 P. trichocarpa v3.1

Defline:  (1 of 11) PTHR31388:SF37 - PEROXIDASE 4-RELATED Genomic Order:  2
Name:  ? Potri.T160100 Secondary Identifier:  ? PAC:37269646

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5466 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6824 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7214 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7445 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T160100 0.5kb upstream 0.5kb upstream 2122 true scaffold_721: 9516-11637 Populus trichocarpa
Potri.T160100 0.5kb upstream 0.5kb upstream 500 false scaffold_721: 9516-10015 Populus trichocarpa
Potri.T160100 0.5kb downstream 0.5kb downstream 2122 true scaffold_721: 10016-12137 Populus trichocarpa
Potri.T160100 0.5kb downstream 0.5kb downstream 500 false scaffold_721: 11638-12137 Populus trichocarpa
Potri.T160100 1.0kb upstream 1.0kb upstream 2622 true scaffold_721: 9016-11637 Populus trichocarpa
Potri.T160100 1.0kb upstream 1.0kb upstream 1000 false scaffold_721: 9016-10015 Populus trichocarpa
Potri.T160100 1.0kb downstream 1.0kb downstream 2622 true scaffold_721: 10016-12637 Populus trichocarpa
Potri.T160100 1.0kb downstream 1.0kb downstream 1000 false scaffold_721: 11638-12637 Populus trichocarpa
Potri.T160100 2.0kb upstream 2.0kb upstream 3622 true scaffold_721: 8016-11637 Populus trichocarpa
Potri.T160100 2.0kb upstream 2.0kb upstream 2000 false scaffold_721: 8016-10015 Populus trichocarpa
Potri.T160100 2.0kb downstream 2.0kb downstream 3622 true scaffold_721: 10016-13637 Populus trichocarpa
Potri.T160100 2.0kb downstream 2.0kb downstream 2000 false scaffold_721: 11638-13637 Populus trichocarpa
Potri.T160100 5.0kb upstream 5.0kb upstream 6622 true scaffold_721: 5016-11637 Populus trichocarpa
Potri.T160100 5.0kb upstream 5.0kb upstream 5000 false scaffold_721: 5016-10015 Populus trichocarpa
Potri.T160100 5.0kb downstream 5.0kb downstream 6622 true scaffold_721: 10016-16637 Populus trichocarpa
Potri.T160100 5.0kb downstream 5.0kb downstream 5000 false scaffold_721: 11638-16637 Populus trichocarpa
Potri.T160100 10.0kb upstream 10.0kb upstream 11622 true scaffold_721: 16-11637 Populus trichocarpa
Potri.T160100 10.0kb upstream 10.0kb upstream 10000 false scaffold_721: 16-10015 Populus trichocarpa
Potri.T160100 10.0kb downstream 10.0kb downstream 9687 true scaffold_721: 10016-19702 Populus trichocarpa
Potri.T160100 10.0kb downstream 10.0kb downstream 8065 false scaffold_721: 11638-19702 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451885 5262 Malpighiales View MSA
124249111 5268 Malvidae View MSA
124068770 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain