Gene : Potri.T065600 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR31846:SF10 - CHLOROPLASTIC GROUP IIA INTRON SPLICING FACILITATOR CRS1, CHLOROPLASTIC Genomic Order:  18
Name:  ? Potri.T065600 Secondary Identifier:  ? PAC:37250985
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T065600 0.5kb upstream 0.5kb upstream 4950 true scaffold_67: 170472-175421 Populus trichocarpa
Potri.T065600 0.5kb upstream 0.5kb upstream 500 false scaffold_67: 174922-175421 Populus trichocarpa
Potri.T065600 0.5kb downstream 0.5kb downstream 4950 true scaffold_67: 169972-174921 Populus trichocarpa
Potri.T065600 0.5kb downstream 0.5kb downstream 500 false scaffold_67: 169972-170471 Populus trichocarpa
Potri.T065600 1.0kb upstream 1.0kb upstream 5450 true scaffold_67: 170472-175921 Populus trichocarpa
Potri.T065600 1.0kb upstream 1.0kb upstream 1000 false scaffold_67: 174922-175921 Populus trichocarpa
Potri.T065600 1.0kb downstream 1.0kb downstream 5450 true scaffold_67: 169472-174921 Populus trichocarpa
Potri.T065600 1.0kb downstream 1.0kb downstream 1000 false scaffold_67: 169472-170471 Populus trichocarpa
Potri.T065600 2.0kb upstream 2.0kb upstream 6450 true scaffold_67: 170472-176921 Populus trichocarpa
Potri.T065600 2.0kb upstream 2.0kb upstream 2000 false scaffold_67: 174922-176921 Populus trichocarpa
Potri.T065600 2.0kb downstream 2.0kb downstream 6450 true scaffold_67: 168472-174921 Populus trichocarpa
Potri.T065600 2.0kb downstream 2.0kb downstream 2000 false scaffold_67: 168472-170471 Populus trichocarpa
Potri.T065600 5.0kb upstream 5.0kb upstream 8390 true scaffold_67: 170472-178861 Populus trichocarpa
Potri.T065600 5.0kb upstream 5.0kb upstream 3940 false scaffold_67: 174922-178861 Populus trichocarpa
Potri.T065600 5.0kb downstream 5.0kb downstream 9450 true scaffold_67: 165472-174921 Populus trichocarpa
Potri.T065600 5.0kb downstream 5.0kb downstream 5000 false scaffold_67: 165472-170471 Populus trichocarpa
Potri.T065600 10.0kb upstream 10.0kb upstream 8390 true scaffold_67: 170472-178861 Populus trichocarpa
Potri.T065600 10.0kb upstream 10.0kb upstream 3940 false scaffold_67: 174922-178861 Populus trichocarpa
Potri.T065600 10.0kb downstream 10.0kb downstream 14450 true scaffold_67: 160472-174921 Populus trichocarpa
Potri.T065600 10.0kb downstream 10.0kb downstream 10000 false scaffold_67: 160472-170471 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122398241 5262 Malpighiales Singleton cluster - no MSA
124195255 5268 Malvidae Singleton cluster - no MSA
124051283 5270 Rosid View MSA
123748527 5271 Pentapetalae View MSA
122791188 5272 Eudicot View MSA
122046600 5273 Angiosperm View MSA
121310632 5274 Embryophyte View MSA
123348066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain