Gene : Podel.T093400 P. deltoides WV94 v2.1
Defline:  (1 of 1) K02256 - cytochrome c oxidase subunit 1 (COX1) Genomic Order:  32
Name:  ? Podel.T093400 Secondary Identifier:  ? PAC:37287974
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-3781 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-7279 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.T093400 0.5kb upstream 0.5kb upstream 2083 true scaffold_22: 227180-229262 Populus deltoides WV94
Podel.T093400 0.5kb upstream 0.5kb upstream 500 false scaffold_22: 227180-227679 Populus deltoides WV94
Podel.T093400 0.5kb downstream 0.5kb downstream 2083 true scaffold_22: 227680-229762 Populus deltoides WV94
Podel.T093400 0.5kb downstream 0.5kb downstream 500 false scaffold_22: 229263-229762 Populus deltoides WV94
Podel.T093400 1.0kb upstream 1.0kb upstream 2583 true scaffold_22: 226680-229262 Populus deltoides WV94
Podel.T093400 1.0kb upstream 1.0kb upstream 1000 false scaffold_22: 226680-227679 Populus deltoides WV94
Podel.T093400 1.0kb downstream 1.0kb downstream 2583 true scaffold_22: 227680-230262 Populus deltoides WV94
Podel.T093400 1.0kb downstream 1.0kb downstream 1000 false scaffold_22: 229263-230262 Populus deltoides WV94
Podel.T093400 2.0kb upstream 2.0kb upstream 3583 true scaffold_22: 225680-229262 Populus deltoides WV94
Podel.T093400 2.0kb upstream 2.0kb upstream 2000 false scaffold_22: 225680-227679 Populus deltoides WV94
Podel.T093400 2.0kb downstream 2.0kb downstream 3583 true scaffold_22: 227680-231262 Populus deltoides WV94
Podel.T093400 2.0kb downstream 2.0kb downstream 2000 false scaffold_22: 229263-231262 Populus deltoides WV94
Podel.T093400 5.0kb upstream 5.0kb upstream 6583 true scaffold_22: 222680-229262 Populus deltoides WV94
Podel.T093400 5.0kb upstream 5.0kb upstream 5000 false scaffold_22: 222680-227679 Populus deltoides WV94
Podel.T093400 5.0kb downstream 5.0kb downstream 6583 true scaffold_22: 227680-234262 Populus deltoides WV94
Podel.T093400 5.0kb downstream 5.0kb downstream 5000 false scaffold_22: 229263-234262 Populus deltoides WV94
Podel.T093400 10.0kb upstream 10.0kb upstream 11583 true scaffold_22: 217680-229262 Populus deltoides WV94
Podel.T093400 10.0kb upstream 10.0kb upstream 10000 false scaffold_22: 217680-227679 Populus deltoides WV94
Podel.T093400 10.0kb downstream 10.0kb downstream 11583 true scaffold_22: 227680-239262 Populus deltoides WV94
Podel.T093400 10.0kb downstream 10.0kb downstream 10000 false scaffold_22: 229263-239262 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026781 5273 Angiosperm View MSA
122414349 5262 Malpighiales View MSA
124247775 5268 Malvidae View MSA
123952190 5270 Rosid View MSA
123750940 5271 Pentapetalae View MSA
122794080 5272 Eudicot View MSA
121348518 5274 Embryophyte View MSA
123380893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier