Gene : Podel.04G100000 P. deltoides WV94 v2.1
Defline:  (1 of 8) K13789 - geranylgeranyl diphosphate synthase, type II (GGPS) Genomic Order:  1000
Name:  ? Podel.04G100000 Secondary Identifier:  ? PAC:37290457
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-5120 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5910 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.04G100000 0.5kb upstream 0.5kb upstream 1783 true Chr04: 9043976-9045758 Populus deltoides WV94
Podel.04G100000 0.5kb upstream 0.5kb upstream 500 false Chr04: 9045259-9045758 Populus deltoides WV94
Podel.04G100000 0.5kb downstream 0.5kb downstream 1783 true Chr04: 9043476-9045258 Populus deltoides WV94
Podel.04G100000 0.5kb downstream 0.5kb downstream 500 false Chr04: 9043476-9043975 Populus deltoides WV94
Podel.04G100000 1.0kb upstream 1.0kb upstream 2283 true Chr04: 9043976-9046258 Populus deltoides WV94
Podel.04G100000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9045259-9046258 Populus deltoides WV94
Podel.04G100000 1.0kb downstream 1.0kb downstream 2283 true Chr04: 9042976-9045258 Populus deltoides WV94
Podel.04G100000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9042976-9043975 Populus deltoides WV94
Podel.04G100000 2.0kb upstream 2.0kb upstream 3283 true Chr04: 9043976-9047258 Populus deltoides WV94
Podel.04G100000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9045259-9047258 Populus deltoides WV94
Podel.04G100000 2.0kb downstream 2.0kb downstream 3283 true Chr04: 9041976-9045258 Populus deltoides WV94
Podel.04G100000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9041976-9043975 Populus deltoides WV94
Podel.04G100000 5.0kb upstream 5.0kb upstream 6283 true Chr04: 9043976-9050258 Populus deltoides WV94
Podel.04G100000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9045259-9050258 Populus deltoides WV94
Podel.04G100000 5.0kb downstream 5.0kb downstream 6283 true Chr04: 9038976-9045258 Populus deltoides WV94
Podel.04G100000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9038976-9043975 Populus deltoides WV94
Podel.04G100000 10.0kb upstream 10.0kb upstream 11283 true Chr04: 9043976-9055258 Populus deltoides WV94
Podel.04G100000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9045259-9055258 Populus deltoides WV94
Podel.04G100000 10.0kb downstream 10.0kb downstream 11283 true Chr04: 9033976-9045258 Populus deltoides WV94
Podel.04G100000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9033976-9043975 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451890 5262 Malpighiales View MSA
124251250 5268 Malvidae View MSA
124051358 5270 Rosid View MSA
123745518 5271 Pentapetalae View MSA
122795597 5272 Eudicot View MSA
122051071 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier