Gene : Podel.T032200 P. deltoides WV94 v2.1

Defline:  (1 of 3) PTHR31852:SF1 - LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED Genomic Order:  2
Name:  ? Podel.T032200 Secondary Identifier:  ? PAC:37325186

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.T032200 0.5kb upstream 0.5kb upstream 1295 true scaffold_1370: 8236-9530 Populus deltoides WV94
Podel.T032200 0.5kb upstream 0.5kb upstream 500 false scaffold_1370: 9031-9530 Populus deltoides WV94
Podel.T032200 0.5kb downstream 0.5kb downstream 1295 true scaffold_1370: 7736-9030 Populus deltoides WV94
Podel.T032200 0.5kb downstream 0.5kb downstream 500 false scaffold_1370: 7736-8235 Populus deltoides WV94
Podel.T032200 1.0kb upstream 1.0kb upstream 1795 true scaffold_1370: 8236-10030 Populus deltoides WV94
Podel.T032200 1.0kb upstream 1.0kb upstream 1000 false scaffold_1370: 9031-10030 Populus deltoides WV94
Podel.T032200 1.0kb downstream 1.0kb downstream 1795 true scaffold_1370: 7236-9030 Populus deltoides WV94
Podel.T032200 1.0kb downstream 1.0kb downstream 1000 false scaffold_1370: 7236-8235 Populus deltoides WV94
Podel.T032200 2.0kb upstream 2.0kb upstream 2795 true scaffold_1370: 8236-11030 Populus deltoides WV94
Podel.T032200 2.0kb upstream 2.0kb upstream 2000 false scaffold_1370: 9031-11030 Populus deltoides WV94
Podel.T032200 2.0kb downstream 2.0kb downstream 2795 true scaffold_1370: 6236-9030 Populus deltoides WV94
Podel.T032200 2.0kb downstream 2.0kb downstream 2000 false scaffold_1370: 6236-8235 Populus deltoides WV94
Podel.T032200 5.0kb upstream 5.0kb upstream 5795 true scaffold_1370: 8236-14030 Populus deltoides WV94
Podel.T032200 5.0kb upstream 5.0kb upstream 5000 false scaffold_1370: 9031-14030 Populus deltoides WV94
Podel.T032200 5.0kb downstream 5.0kb downstream 5795 true scaffold_1370: 3236-9030 Populus deltoides WV94
Podel.T032200 5.0kb downstream 5.0kb downstream 5000 false scaffold_1370: 3236-8235 Populus deltoides WV94
Podel.T032200 10.0kb upstream 10.0kb upstream 6108 true scaffold_1370: 8236-14343 Populus deltoides WV94
Podel.T032200 10.0kb upstream 10.0kb upstream 5313 false scaffold_1370: 9031-14343 Populus deltoides WV94
Podel.T032200 10.0kb downstream 10.0kb downstream 9030 true scaffold_1370: 1-9030 Populus deltoides WV94
Podel.T032200 10.0kb downstream 10.0kb downstream 8235 false scaffold_1370: 1-8235 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122384031 5262 Malpighiales View MSA
124243189 5268 Malvidae View MSA
124063776 5270 Rosid View MSA
123751487 5271 Pentapetalae View MSA
122787858 5272 Eudicot View MSA
122044505 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier