Gene : Podel.17G035200 P. deltoides WV94 v2.1

Defline:  (1 of 18) 6.2.1.3 - Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase Genomic Order:  352
Name:  ? Podel.17G035200 Secondary Identifier:  ? PAC:37320139

Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-1121 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-321 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5136 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5143 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5147 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5156 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-561 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5885 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5971 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5989 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY66-389 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-6733 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-6803 Populus deltoides WV94 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.17G035200 0.5kb upstream 0.5kb upstream 5285 true Chr17: 3015990-3021274 Populus deltoides WV94
Podel.17G035200 0.5kb upstream 0.5kb upstream 500 false Chr17: 3015990-3016489 Populus deltoides WV94
Podel.17G035200 0.5kb downstream 0.5kb downstream 5285 true Chr17: 3016490-3021774 Populus deltoides WV94
Podel.17G035200 0.5kb downstream 0.5kb downstream 500 false Chr17: 3021275-3021774 Populus deltoides WV94
Podel.17G035200 1.0kb upstream 1.0kb upstream 5785 true Chr17: 3015490-3021274 Populus deltoides WV94
Podel.17G035200 1.0kb upstream 1.0kb upstream 1000 false Chr17: 3015490-3016489 Populus deltoides WV94
Podel.17G035200 1.0kb downstream 1.0kb downstream 5785 true Chr17: 3016490-3022274 Populus deltoides WV94
Podel.17G035200 1.0kb downstream 1.0kb downstream 1000 false Chr17: 3021275-3022274 Populus deltoides WV94
Podel.17G035200 2.0kb upstream 2.0kb upstream 6785 true Chr17: 3014490-3021274 Populus deltoides WV94
Podel.17G035200 2.0kb upstream 2.0kb upstream 2000 false Chr17: 3014490-3016489 Populus deltoides WV94
Podel.17G035200 2.0kb downstream 2.0kb downstream 6785 true Chr17: 3016490-3023274 Populus deltoides WV94
Podel.17G035200 2.0kb downstream 2.0kb downstream 2000 false Chr17: 3021275-3023274 Populus deltoides WV94
Podel.17G035200 5.0kb upstream 5.0kb upstream 9785 true Chr17: 3011490-3021274 Populus deltoides WV94
Podel.17G035200 5.0kb upstream 5.0kb upstream 5000 false Chr17: 3011490-3016489 Populus deltoides WV94
Podel.17G035200 5.0kb downstream 5.0kb downstream 9785 true Chr17: 3016490-3026274 Populus deltoides WV94
Podel.17G035200 5.0kb downstream 5.0kb downstream 5000 false Chr17: 3021275-3026274 Populus deltoides WV94
Podel.17G035200 10.0kb upstream 10.0kb upstream 14785 true Chr17: 3006490-3021274 Populus deltoides WV94
Podel.17G035200 10.0kb upstream 10.0kb upstream 10000 false Chr17: 3006490-3016489 Populus deltoides WV94
Podel.17G035200 10.0kb downstream 10.0kb downstream 14785 true Chr17: 3016490-3031274 Populus deltoides WV94
Podel.17G035200 10.0kb downstream 10.0kb downstream 10000 false Chr17: 3021275-3031274 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464382 5262 Malpighiales View MSA
124250564 5268 Malvidae View MSA
124071918 5270 Rosid View MSA
123745043 5271 Pentapetalae View MSA
122795708 5272 Eudicot View MSA
122045138 5273 Angiosperm View MSA
121310405 5274 Embryophyte View MSA
123347895 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier