Gene : Podel.17G122000 P. deltoides WV94 v2.1
Defline:  (1 of 3) PTHR12161:SF23 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  1220
Name:  ? Podel.17G122000 Secondary Identifier:  ? PAC:37320254
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.17G122000 0.5kb upstream 0.5kb upstream 2703 true Chr17: 12907939-12910641 Populus deltoides WV94
Podel.17G122000 0.5kb upstream 0.5kb upstream 500 false Chr17: 12910142-12910641 Populus deltoides WV94
Podel.17G122000 0.5kb downstream 0.5kb downstream 2703 true Chr17: 12907439-12910141 Populus deltoides WV94
Podel.17G122000 0.5kb downstream 0.5kb downstream 500 false Chr17: 12907439-12907938 Populus deltoides WV94
Podel.17G122000 1.0kb upstream 1.0kb upstream 3203 true Chr17: 12907939-12911141 Populus deltoides WV94
Podel.17G122000 1.0kb upstream 1.0kb upstream 1000 false Chr17: 12910142-12911141 Populus deltoides WV94
Podel.17G122000 1.0kb downstream 1.0kb downstream 3203 true Chr17: 12906939-12910141 Populus deltoides WV94
Podel.17G122000 1.0kb downstream 1.0kb downstream 1000 false Chr17: 12906939-12907938 Populus deltoides WV94
Podel.17G122000 2.0kb upstream 2.0kb upstream 4203 true Chr17: 12907939-12912141 Populus deltoides WV94
Podel.17G122000 2.0kb upstream 2.0kb upstream 2000 false Chr17: 12910142-12912141 Populus deltoides WV94
Podel.17G122000 2.0kb downstream 2.0kb downstream 4203 true Chr17: 12905939-12910141 Populus deltoides WV94
Podel.17G122000 2.0kb downstream 2.0kb downstream 2000 false Chr17: 12905939-12907938 Populus deltoides WV94
Podel.17G122000 5.0kb upstream 5.0kb upstream 7203 true Chr17: 12907939-12915141 Populus deltoides WV94
Podel.17G122000 5.0kb upstream 5.0kb upstream 5000 false Chr17: 12910142-12915141 Populus deltoides WV94
Podel.17G122000 5.0kb downstream 5.0kb downstream 7203 true Chr17: 12902939-12910141 Populus deltoides WV94
Podel.17G122000 5.0kb downstream 5.0kb downstream 5000 false Chr17: 12902939-12907938 Populus deltoides WV94
Podel.17G122000 10.0kb upstream 10.0kb upstream 12203 true Chr17: 12907939-12920141 Populus deltoides WV94
Podel.17G122000 10.0kb upstream 10.0kb upstream 10000 false Chr17: 12910142-12920141 Populus deltoides WV94
Podel.17G122000 10.0kb downstream 10.0kb downstream 12203 true Chr17: 12897939-12910141 Populus deltoides WV94
Podel.17G122000 10.0kb downstream 10.0kb downstream 10000 false Chr17: 12897939-12907938 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448387 5262 Malpighiales View MSA
124254713 5268 Malvidae View MSA
124073435 5270 Rosid View MSA
123752989 5271 Pentapetalae View MSA
122793014 5272 Eudicot View MSA
122045384 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier