Gene : Podel.17G133800 P. deltoides WV94 v2.1

Defline:  (1 of 2) K01814 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA) Genomic Order:  1338
Name:  ? Podel.17G133800 Secondary Identifier:  ? PAC:37321462

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 HISTSYN-PWY Populus deltoides WV94 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.17G133800 0.5kb upstream 0.5kb upstream 5181 true Chr17: 13780435-13785615 Populus deltoides WV94
Podel.17G133800 0.5kb upstream 0.5kb upstream 500 false Chr17: 13785116-13785615 Populus deltoides WV94
Podel.17G133800 0.5kb downstream 0.5kb downstream 5181 true Chr17: 13779935-13785115 Populus deltoides WV94
Podel.17G133800 0.5kb downstream 0.5kb downstream 500 false Chr17: 13779935-13780434 Populus deltoides WV94
Podel.17G133800 1.0kb upstream 1.0kb upstream 5681 true Chr17: 13780435-13786115 Populus deltoides WV94
Podel.17G133800 1.0kb upstream 1.0kb upstream 1000 false Chr17: 13785116-13786115 Populus deltoides WV94
Podel.17G133800 1.0kb downstream 1.0kb downstream 5681 true Chr17: 13779435-13785115 Populus deltoides WV94
Podel.17G133800 1.0kb downstream 1.0kb downstream 1000 false Chr17: 13779435-13780434 Populus deltoides WV94
Podel.17G133800 2.0kb upstream 2.0kb upstream 6681 true Chr17: 13780435-13787115 Populus deltoides WV94
Podel.17G133800 2.0kb upstream 2.0kb upstream 2000 false Chr17: 13785116-13787115 Populus deltoides WV94
Podel.17G133800 2.0kb downstream 2.0kb downstream 6681 true Chr17: 13778435-13785115 Populus deltoides WV94
Podel.17G133800 2.0kb downstream 2.0kb downstream 2000 false Chr17: 13778435-13780434 Populus deltoides WV94
Podel.17G133800 5.0kb upstream 5.0kb upstream 9681 true Chr17: 13780435-13790115 Populus deltoides WV94
Podel.17G133800 5.0kb upstream 5.0kb upstream 5000 false Chr17: 13785116-13790115 Populus deltoides WV94
Podel.17G133800 5.0kb downstream 5.0kb downstream 9681 true Chr17: 13775435-13785115 Populus deltoides WV94
Podel.17G133800 5.0kb downstream 5.0kb downstream 5000 false Chr17: 13775435-13780434 Populus deltoides WV94
Podel.17G133800 10.0kb upstream 10.0kb upstream 14681 true Chr17: 13780435-13795115 Populus deltoides WV94
Podel.17G133800 10.0kb upstream 10.0kb upstream 10000 false Chr17: 13785116-13795115 Populus deltoides WV94
Podel.17G133800 10.0kb downstream 10.0kb downstream 14681 true Chr17: 13770435-13785115 Populus deltoides WV94
Podel.17G133800 10.0kb downstream 10.0kb downstream 10000 false Chr17: 13770435-13780434 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041281 5273 Angiosperm View MSA
122455867 5262 Malpighiales View MSA
124249241 5268 Malvidae View MSA
124061773 5270 Rosid View MSA
123737700 5271 Pentapetalae View MSA
122790553 5272 Eudicot View MSA
121347171 5274 Embryophyte View MSA
123424389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier