Gene : Podel.06G160500 P. deltoides WV94 v2.1
Defline:  (1 of 1) 5.5.1.18 - Lycopene epsilon-cyclase Genomic Order:  1605
Name:  ? Podel.06G160500 Secondary Identifier:  ? PAC:37325340
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 CAROTENOID-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5175 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5946 Populus deltoides WV94 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.06G160500 0.5kb upstream 0.5kb upstream 7932 true Chr06: 14050698-14058629 Populus deltoides WV94
Podel.06G160500 0.5kb upstream 0.5kb upstream 500 false Chr06: 14058130-14058629 Populus deltoides WV94
Podel.06G160500 0.5kb downstream 0.5kb downstream 7932 true Chr06: 14050198-14058129 Populus deltoides WV94
Podel.06G160500 0.5kb downstream 0.5kb downstream 500 false Chr06: 14050198-14050697 Populus deltoides WV94
Podel.06G160500 1.0kb upstream 1.0kb upstream 8432 true Chr06: 14050698-14059129 Populus deltoides WV94
Podel.06G160500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14058130-14059129 Populus deltoides WV94
Podel.06G160500 1.0kb downstream 1.0kb downstream 8432 true Chr06: 14049698-14058129 Populus deltoides WV94
Podel.06G160500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14049698-14050697 Populus deltoides WV94
Podel.06G160500 2.0kb upstream 2.0kb upstream 9432 true Chr06: 14050698-14060129 Populus deltoides WV94
Podel.06G160500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14058130-14060129 Populus deltoides WV94
Podel.06G160500 2.0kb downstream 2.0kb downstream 9432 true Chr06: 14048698-14058129 Populus deltoides WV94
Podel.06G160500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14048698-14050697 Populus deltoides WV94
Podel.06G160500 5.0kb upstream 5.0kb upstream 12432 true Chr06: 14050698-14063129 Populus deltoides WV94
Podel.06G160500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14058130-14063129 Populus deltoides WV94
Podel.06G160500 5.0kb downstream 5.0kb downstream 12432 true Chr06: 14045698-14058129 Populus deltoides WV94
Podel.06G160500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14045698-14050697 Populus deltoides WV94
Podel.06G160500 10.0kb upstream 10.0kb upstream 17432 true Chr06: 14050698-14068129 Populus deltoides WV94
Podel.06G160500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14058130-14068129 Populus deltoides WV94
Podel.06G160500 10.0kb downstream 10.0kb downstream 17432 true Chr06: 14040698-14058129 Populus deltoides WV94
Podel.06G160500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14040698-14050697 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458416 5262 Malpighiales View MSA
124243060 5268 Malvidae View MSA
124068333 5270 Rosid View MSA
123739919 5271 Pentapetalae View MSA
122791667 5272 Eudicot View MSA
122041543 5273 Angiosperm View MSA
121345455 5274 Embryophyte View MSA
123424108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier