Gene : Podel.06G043400 P. deltoides WV94 v2.1
Defline:  (1 of 5) 5.5.1.19 - Lycopene beta-cyclase Genomic Order:  434
Name:  ? Podel.06G043400 Secondary Identifier:  ? PAC:37328423
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 CAROTENOID-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5943 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5947 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.06G043400 0.5kb upstream 0.5kb upstream 2263 true Chr06: 3110252-3112514 Populus deltoides WV94
Podel.06G043400 0.5kb upstream 0.5kb upstream 500 false Chr06: 3112015-3112514 Populus deltoides WV94
Podel.06G043400 0.5kb downstream 0.5kb downstream 2263 true Chr06: 3109752-3112014 Populus deltoides WV94
Podel.06G043400 0.5kb downstream 0.5kb downstream 500 false Chr06: 3109752-3110251 Populus deltoides WV94
Podel.06G043400 1.0kb upstream 1.0kb upstream 2763 true Chr06: 3110252-3113014 Populus deltoides WV94
Podel.06G043400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3112015-3113014 Populus deltoides WV94
Podel.06G043400 1.0kb downstream 1.0kb downstream 2763 true Chr06: 3109252-3112014 Populus deltoides WV94
Podel.06G043400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3109252-3110251 Populus deltoides WV94
Podel.06G043400 2.0kb upstream 2.0kb upstream 3763 true Chr06: 3110252-3114014 Populus deltoides WV94
Podel.06G043400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3112015-3114014 Populus deltoides WV94
Podel.06G043400 2.0kb downstream 2.0kb downstream 3763 true Chr06: 3108252-3112014 Populus deltoides WV94
Podel.06G043400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3108252-3110251 Populus deltoides WV94
Podel.06G043400 5.0kb upstream 5.0kb upstream 6763 true Chr06: 3110252-3117014 Populus deltoides WV94
Podel.06G043400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3112015-3117014 Populus deltoides WV94
Podel.06G043400 5.0kb downstream 5.0kb downstream 6763 true Chr06: 3105252-3112014 Populus deltoides WV94
Podel.06G043400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3105252-3110251 Populus deltoides WV94
Podel.06G043400 10.0kb upstream 10.0kb upstream 11763 true Chr06: 3110252-3122014 Populus deltoides WV94
Podel.06G043400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3112015-3122014 Populus deltoides WV94
Podel.06G043400 10.0kb downstream 10.0kb downstream 11763 true Chr06: 3100252-3112014 Populus deltoides WV94
Podel.06G043400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3100252-3110251 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449867 5262 Malpighiales View MSA
124240984 5268 Malvidae View MSA
124065821 5270 Rosid View MSA
123737595 5271 Pentapetalae View MSA
122786885 5272 Eudicot View MSA
122046204 5273 Angiosperm View MSA
121345644 5274 Embryophyte View MSA
123423874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier