Gene : Podel.18G043800 P. deltoides WV94 v2.1
Defline:  (1 of 1) K17913 - carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase (CCD8) Genomic Order:  438
Name:  ? Podel.18G043800 Secondary Identifier:  ? PAC:37315648
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-7101 Populus deltoides WV94 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.18G043800 0.5kb upstream 0.5kb upstream 3997 true Chr18: 3895673-3899669 Populus deltoides WV94
Podel.18G043800 0.5kb upstream 0.5kb upstream 500 false Chr18: 3895673-3896172 Populus deltoides WV94
Podel.18G043800 0.5kb downstream 0.5kb downstream 3997 true Chr18: 3896173-3900169 Populus deltoides WV94
Podel.18G043800 0.5kb downstream 0.5kb downstream 500 false Chr18: 3899670-3900169 Populus deltoides WV94
Podel.18G043800 1.0kb upstream 1.0kb upstream 4497 true Chr18: 3895173-3899669 Populus deltoides WV94
Podel.18G043800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3895173-3896172 Populus deltoides WV94
Podel.18G043800 1.0kb downstream 1.0kb downstream 4497 true Chr18: 3896173-3900669 Populus deltoides WV94
Podel.18G043800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3899670-3900669 Populus deltoides WV94
Podel.18G043800 2.0kb upstream 2.0kb upstream 5497 true Chr18: 3894173-3899669 Populus deltoides WV94
Podel.18G043800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3894173-3896172 Populus deltoides WV94
Podel.18G043800 2.0kb downstream 2.0kb downstream 5497 true Chr18: 3896173-3901669 Populus deltoides WV94
Podel.18G043800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3899670-3901669 Populus deltoides WV94
Podel.18G043800 5.0kb upstream 5.0kb upstream 8497 true Chr18: 3891173-3899669 Populus deltoides WV94
Podel.18G043800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3891173-3896172 Populus deltoides WV94
Podel.18G043800 5.0kb downstream 5.0kb downstream 8497 true Chr18: 3896173-3904669 Populus deltoides WV94
Podel.18G043800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3899670-3904669 Populus deltoides WV94
Podel.18G043800 10.0kb upstream 10.0kb upstream 13497 true Chr18: 3886173-3899669 Populus deltoides WV94
Podel.18G043800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3886173-3896172 Populus deltoides WV94
Podel.18G043800 10.0kb downstream 10.0kb downstream 13497 true Chr18: 3896173-3909669 Populus deltoides WV94
Podel.18G043800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3899670-3909669 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458364 5262 Malpighiales View MSA
124238264 5268 Malvidae View MSA
124065320 5270 Rosid View MSA
123738795 5271 Pentapetalae View MSA
122791259 5272 Eudicot View MSA
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier