Gene : Podel.03G241900 P. deltoides WV94 v2.1
Defline:  (1 of 2) PTHR22594:SF20 - LYSINE--TRNA LIGASE Genomic Order:  2419
Name:  ? Podel.03G241900 Secondary Identifier:  ? PAC:37322950
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 TRNA-CHARGING-PWY Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.03G241900 0.5kb upstream 0.5kb upstream 6535 true Chr03: 22753992-22760526 Populus deltoides WV94
Podel.03G241900 0.5kb upstream 0.5kb upstream 500 false Chr03: 22753992-22754491 Populus deltoides WV94
Podel.03G241900 0.5kb downstream 0.5kb downstream 6535 true Chr03: 22754492-22761026 Populus deltoides WV94
Podel.03G241900 0.5kb downstream 0.5kb downstream 500 false Chr03: 22760527-22761026 Populus deltoides WV94
Podel.03G241900 1.0kb upstream 1.0kb upstream 7035 true Chr03: 22753492-22760526 Populus deltoides WV94
Podel.03G241900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 22753492-22754491 Populus deltoides WV94
Podel.03G241900 1.0kb downstream 1.0kb downstream 7035 true Chr03: 22754492-22761526 Populus deltoides WV94
Podel.03G241900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 22760527-22761526 Populus deltoides WV94
Podel.03G241900 2.0kb upstream 2.0kb upstream 8035 true Chr03: 22752492-22760526 Populus deltoides WV94
Podel.03G241900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 22752492-22754491 Populus deltoides WV94
Podel.03G241900 2.0kb downstream 2.0kb downstream 8035 true Chr03: 22754492-22762526 Populus deltoides WV94
Podel.03G241900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 22760527-22762526 Populus deltoides WV94
Podel.03G241900 5.0kb upstream 5.0kb upstream 11035 true Chr03: 22749492-22760526 Populus deltoides WV94
Podel.03G241900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 22749492-22754491 Populus deltoides WV94
Podel.03G241900 5.0kb downstream 5.0kb downstream 11035 true Chr03: 22754492-22765526 Populus deltoides WV94
Podel.03G241900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 22760527-22765526 Populus deltoides WV94
Podel.03G241900 10.0kb upstream 10.0kb upstream 16035 true Chr03: 22744492-22760526 Populus deltoides WV94
Podel.03G241900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 22744492-22754491 Populus deltoides WV94
Podel.03G241900 10.0kb downstream 10.0kb downstream 16035 true Chr03: 22754492-22770526 Populus deltoides WV94
Podel.03G241900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 22760527-22770526 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458438 5262 Malpighiales View MSA
124239048 5268 Malvidae View MSA
124063653 5270 Rosid View MSA
123739204 5271 Pentapetalae View MSA
122788489 5272 Eudicot View MSA
122044302 5273 Angiosperm View MSA
121346599 5274 Embryophyte View MSA
123423817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier