Gene : Podel.05G100300 P. deltoides WV94 v2.1

Defline:  (1 of 1) PTHR11404:SF17 - SUPEROXIDE DISMUTASE [FE] 3, CHLOROPLASTIC Genomic Order:  1003
Name:  ? Podel.05G100300 Secondary Identifier:  ? PAC:37318648

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 DETOX1-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 DETOX1-PWY-1 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-6854 Populus deltoides WV94 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.05G100300 0.5kb upstream 0.5kb upstream 3565 true Chr05: 7139521-7143085 Populus deltoides WV94
Podel.05G100300 0.5kb upstream 0.5kb upstream 500 false Chr05: 7142586-7143085 Populus deltoides WV94
Podel.05G100300 0.5kb downstream 0.5kb downstream 3565 true Chr05: 7139021-7142585 Populus deltoides WV94
Podel.05G100300 0.5kb downstream 0.5kb downstream 500 false Chr05: 7139021-7139520 Populus deltoides WV94
Podel.05G100300 1.0kb upstream 1.0kb upstream 4065 true Chr05: 7139521-7143585 Populus deltoides WV94
Podel.05G100300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7142586-7143585 Populus deltoides WV94
Podel.05G100300 1.0kb downstream 1.0kb downstream 4065 true Chr05: 7138521-7142585 Populus deltoides WV94
Podel.05G100300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7138521-7139520 Populus deltoides WV94
Podel.05G100300 2.0kb upstream 2.0kb upstream 5065 true Chr05: 7139521-7144585 Populus deltoides WV94
Podel.05G100300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7142586-7144585 Populus deltoides WV94
Podel.05G100300 2.0kb downstream 2.0kb downstream 5065 true Chr05: 7137521-7142585 Populus deltoides WV94
Podel.05G100300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7137521-7139520 Populus deltoides WV94
Podel.05G100300 5.0kb upstream 5.0kb upstream 8065 true Chr05: 7139521-7147585 Populus deltoides WV94
Podel.05G100300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7142586-7147585 Populus deltoides WV94
Podel.05G100300 5.0kb downstream 5.0kb downstream 8065 true Chr05: 7134521-7142585 Populus deltoides WV94
Podel.05G100300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7134521-7139520 Populus deltoides WV94
Podel.05G100300 10.0kb upstream 10.0kb upstream 13065 true Chr05: 7139521-7152585 Populus deltoides WV94
Podel.05G100300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7142586-7152585 Populus deltoides WV94
Podel.05G100300 10.0kb downstream 10.0kb downstream 13065 true Chr05: 7129521-7142585 Populus deltoides WV94
Podel.05G100300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7129521-7139520 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453852 5262 Malpighiales View MSA
124242563 5268 Malvidae View MSA
124067465 5270 Rosid View MSA
123740223 5271 Pentapetalae View MSA
122788752 5272 Eudicot View MSA
122044976 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier