Gene : Podel.05G101900 P. deltoides WV94 v2.1
Defline:  (1 of 3) K01899 - succinyl-CoA synthetase alpha subunit (LSC1) Genomic Order:  1019
Name:  ? Podel.05G101900 Secondary Identifier:  ? PAC:37316628
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-5464 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5690 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.05G101900 0.5kb upstream 0.5kb upstream 4802 true Chr05: 7251677-7256478 Populus deltoides WV94
Podel.05G101900 0.5kb upstream 0.5kb upstream 500 false Chr05: 7255979-7256478 Populus deltoides WV94
Podel.05G101900 0.5kb downstream 0.5kb downstream 4802 true Chr05: 7251177-7255978 Populus deltoides WV94
Podel.05G101900 0.5kb downstream 0.5kb downstream 500 false Chr05: 7251177-7251676 Populus deltoides WV94
Podel.05G101900 1.0kb upstream 1.0kb upstream 5302 true Chr05: 7251677-7256978 Populus deltoides WV94
Podel.05G101900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7255979-7256978 Populus deltoides WV94
Podel.05G101900 1.0kb downstream 1.0kb downstream 5302 true Chr05: 7250677-7255978 Populus deltoides WV94
Podel.05G101900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7250677-7251676 Populus deltoides WV94
Podel.05G101900 2.0kb upstream 2.0kb upstream 6302 true Chr05: 7251677-7257978 Populus deltoides WV94
Podel.05G101900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7255979-7257978 Populus deltoides WV94
Podel.05G101900 2.0kb downstream 2.0kb downstream 6302 true Chr05: 7249677-7255978 Populus deltoides WV94
Podel.05G101900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7249677-7251676 Populus deltoides WV94
Podel.05G101900 5.0kb upstream 5.0kb upstream 9302 true Chr05: 7251677-7260978 Populus deltoides WV94
Podel.05G101900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7255979-7260978 Populus deltoides WV94
Podel.05G101900 5.0kb downstream 5.0kb downstream 9302 true Chr05: 7246677-7255978 Populus deltoides WV94
Podel.05G101900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7246677-7251676 Populus deltoides WV94
Podel.05G101900 10.0kb upstream 10.0kb upstream 14302 true Chr05: 7251677-7265978 Populus deltoides WV94
Podel.05G101900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7255979-7265978 Populus deltoides WV94
Podel.05G101900 10.0kb downstream 10.0kb downstream 14302 true Chr05: 7241677-7255978 Populus deltoides WV94
Podel.05G101900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7241677-7251676 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460895 5262 Malpighiales View MSA
124250817 5268 Malvidae View MSA
124071271 5270 Rosid View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier