Gene : Podel.05G045400 P. deltoides WV94 v2.1
Defline:  (1 of 2) PTHR21089//PTHR21089:SF10 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  454
Name:  ? Podel.05G045400 Secondary Identifier:  ? PAC:37316578
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 ARO-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-6163 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.05G045400 0.5kb upstream 0.5kb upstream 6031 true Chr05: 3170313-3176343 Populus deltoides WV94
Podel.05G045400 0.5kb upstream 0.5kb upstream 500 false Chr05: 3175844-3176343 Populus deltoides WV94
Podel.05G045400 0.5kb downstream 0.5kb downstream 6031 true Chr05: 3169813-3175843 Populus deltoides WV94
Podel.05G045400 0.5kb downstream 0.5kb downstream 500 false Chr05: 3169813-3170312 Populus deltoides WV94
Podel.05G045400 1.0kb upstream 1.0kb upstream 6531 true Chr05: 3170313-3176843 Populus deltoides WV94
Podel.05G045400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3175844-3176843 Populus deltoides WV94
Podel.05G045400 1.0kb downstream 1.0kb downstream 6531 true Chr05: 3169313-3175843 Populus deltoides WV94
Podel.05G045400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3169313-3170312 Populus deltoides WV94
Podel.05G045400 2.0kb upstream 2.0kb upstream 7531 true Chr05: 3170313-3177843 Populus deltoides WV94
Podel.05G045400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3175844-3177843 Populus deltoides WV94
Podel.05G045400 2.0kb downstream 2.0kb downstream 7531 true Chr05: 3168313-3175843 Populus deltoides WV94
Podel.05G045400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3168313-3170312 Populus deltoides WV94
Podel.05G045400 5.0kb upstream 5.0kb upstream 10531 true Chr05: 3170313-3180843 Populus deltoides WV94
Podel.05G045400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3175844-3180843 Populus deltoides WV94
Podel.05G045400 5.0kb downstream 5.0kb downstream 10531 true Chr05: 3165313-3175843 Populus deltoides WV94
Podel.05G045400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3165313-3170312 Populus deltoides WV94
Podel.05G045400 10.0kb upstream 10.0kb upstream 15531 true Chr05: 3170313-3185843 Populus deltoides WV94
Podel.05G045400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3175844-3185843 Populus deltoides WV94
Podel.05G045400 10.0kb downstream 10.0kb downstream 15531 true Chr05: 3160313-3175843 Populus deltoides WV94
Podel.05G045400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3160313-3170312 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791917 5273 Angiosperm View MSA
122461731 5262 Malpighiales View MSA
124246373 5268 Malvidae View MSA
124070168 5270 Rosid View MSA
123749206 5271 Pentapetalae View MSA
122795293 5272 Eudicot View MSA
121063186 5274 Embryophyte View MSA
123102956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier