Gene : Podel.12G038100 P. deltoides WV94 v2.1
Defline:  (1 of 3) K01899 - succinyl-CoA synthetase alpha subunit (LSC1) Genomic Order:  381
Name:  ? Podel.12G038100 Secondary Identifier:  ? PAC:37284256
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-5464 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5690 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.12G038100 0.5kb upstream 0.5kb upstream 5429 true Chr12: 3129025-3134453 Populus deltoides WV94
Podel.12G038100 0.5kb upstream 0.5kb upstream 500 false Chr12: 3129025-3129524 Populus deltoides WV94
Podel.12G038100 0.5kb downstream 0.5kb downstream 5429 true Chr12: 3129525-3134953 Populus deltoides WV94
Podel.12G038100 0.5kb downstream 0.5kb downstream 500 false Chr12: 3134454-3134953 Populus deltoides WV94
Podel.12G038100 1.0kb upstream 1.0kb upstream 5929 true Chr12: 3128525-3134453 Populus deltoides WV94
Podel.12G038100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3128525-3129524 Populus deltoides WV94
Podel.12G038100 1.0kb downstream 1.0kb downstream 5929 true Chr12: 3129525-3135453 Populus deltoides WV94
Podel.12G038100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3134454-3135453 Populus deltoides WV94
Podel.12G038100 2.0kb upstream 2.0kb upstream 6929 true Chr12: 3127525-3134453 Populus deltoides WV94
Podel.12G038100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3127525-3129524 Populus deltoides WV94
Podel.12G038100 2.0kb downstream 2.0kb downstream 6929 true Chr12: 3129525-3136453 Populus deltoides WV94
Podel.12G038100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3134454-3136453 Populus deltoides WV94
Podel.12G038100 5.0kb upstream 5.0kb upstream 9929 true Chr12: 3124525-3134453 Populus deltoides WV94
Podel.12G038100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3124525-3129524 Populus deltoides WV94
Podel.12G038100 5.0kb downstream 5.0kb downstream 9929 true Chr12: 3129525-3139453 Populus deltoides WV94
Podel.12G038100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3134454-3139453 Populus deltoides WV94
Podel.12G038100 10.0kb upstream 10.0kb upstream 14929 true Chr12: 3119525-3134453 Populus deltoides WV94
Podel.12G038100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3119525-3129524 Populus deltoides WV94
Podel.12G038100 10.0kb downstream 10.0kb downstream 14929 true Chr12: 3129525-3144453 Populus deltoides WV94
Podel.12G038100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3134454-3144453 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460895 5262 Malpighiales View MSA
124250817 5268 Malvidae View MSA
124071271 5270 Rosid View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier