Gene : Podel.01G205700 P. deltoides WV94 v2.1

Defline:  (1 of 2) K12197 - charged multivesicular body protein 1 (CHMP1, VPS46, DID2) Genomic Order:  2057
Name:  ? Podel.01G205700 Secondary Identifier:  ? PAC:37307767

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.01G205700 0.5kb upstream 0.5kb upstream 1848 true Chr01: 18983971-18985818 Populus deltoides WV94
Podel.01G205700 0.5kb upstream 0.5kb upstream 500 false Chr01: 18983971-18984470 Populus deltoides WV94
Podel.01G205700 0.5kb downstream 0.5kb downstream 1848 true Chr01: 18984471-18986318 Populus deltoides WV94
Podel.01G205700 0.5kb downstream 0.5kb downstream 500 false Chr01: 18985819-18986318 Populus deltoides WV94
Podel.01G205700 1.0kb upstream 1.0kb upstream 2348 true Chr01: 18983471-18985818 Populus deltoides WV94
Podel.01G205700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 18983471-18984470 Populus deltoides WV94
Podel.01G205700 1.0kb downstream 1.0kb downstream 2348 true Chr01: 18984471-18986818 Populus deltoides WV94
Podel.01G205700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 18985819-18986818 Populus deltoides WV94
Podel.01G205700 2.0kb upstream 2.0kb upstream 3348 true Chr01: 18982471-18985818 Populus deltoides WV94
Podel.01G205700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 18982471-18984470 Populus deltoides WV94
Podel.01G205700 2.0kb downstream 2.0kb downstream 3348 true Chr01: 18984471-18987818 Populus deltoides WV94
Podel.01G205700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 18985819-18987818 Populus deltoides WV94
Podel.01G205700 5.0kb upstream 5.0kb upstream 6348 true Chr01: 18979471-18985818 Populus deltoides WV94
Podel.01G205700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 18979471-18984470 Populus deltoides WV94
Podel.01G205700 5.0kb downstream 5.0kb downstream 6348 true Chr01: 18984471-18990818 Populus deltoides WV94
Podel.01G205700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 18985819-18990818 Populus deltoides WV94
Podel.01G205700 10.0kb upstream 10.0kb upstream 11348 true Chr01: 18974471-18985818 Populus deltoides WV94
Podel.01G205700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 18974471-18984470 Populus deltoides WV94
Podel.01G205700 10.0kb downstream 10.0kb downstream 11348 true Chr01: 18984471-18995818 Populus deltoides WV94
Podel.01G205700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 18985819-18995818 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453098 5262 Malpighiales View MSA
124253428 5268 Malvidae View MSA
124063895 5270 Rosid View MSA
123748216 5271 Pentapetalae View MSA
122794716 5272 Eudicot View MSA
122044262 5273 Angiosperm View MSA
121349635 5274 Embryophyte View MSA
123427092 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier