Gene : Podel.01G392900 P. deltoides WV94 v2.1
Defline:  (1 of 11) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  3929
Name:  ? Podel.01G392900 Secondary Identifier:  ? PAC:37308386
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.01G392900 0.5kb upstream 0.5kb upstream 3502 true Chr01: 41549232-41552733 Populus deltoides WV94
Podel.01G392900 0.5kb upstream 0.5kb upstream 500 false Chr01: 41549232-41549731 Populus deltoides WV94
Podel.01G392900 0.5kb downstream 0.5kb downstream 3502 true Chr01: 41549732-41553233 Populus deltoides WV94
Podel.01G392900 0.5kb downstream 0.5kb downstream 500 false Chr01: 41552734-41553233 Populus deltoides WV94
Podel.01G392900 1.0kb upstream 1.0kb upstream 4002 true Chr01: 41548732-41552733 Populus deltoides WV94
Podel.01G392900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41548732-41549731 Populus deltoides WV94
Podel.01G392900 1.0kb downstream 1.0kb downstream 4002 true Chr01: 41549732-41553733 Populus deltoides WV94
Podel.01G392900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41552734-41553733 Populus deltoides WV94
Podel.01G392900 2.0kb upstream 2.0kb upstream 5002 true Chr01: 41547732-41552733 Populus deltoides WV94
Podel.01G392900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41547732-41549731 Populus deltoides WV94
Podel.01G392900 2.0kb downstream 2.0kb downstream 5002 true Chr01: 41549732-41554733 Populus deltoides WV94
Podel.01G392900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41552734-41554733 Populus deltoides WV94
Podel.01G392900 5.0kb upstream 5.0kb upstream 8002 true Chr01: 41544732-41552733 Populus deltoides WV94
Podel.01G392900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41544732-41549731 Populus deltoides WV94
Podel.01G392900 5.0kb downstream 5.0kb downstream 8002 true Chr01: 41549732-41557733 Populus deltoides WV94
Podel.01G392900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41552734-41557733 Populus deltoides WV94
Podel.01G392900 10.0kb upstream 10.0kb upstream 13002 true Chr01: 41539732-41552733 Populus deltoides WV94
Podel.01G392900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41539732-41549731 Populus deltoides WV94
Podel.01G392900 10.0kb downstream 10.0kb downstream 13002 true Chr01: 41549732-41562733 Populus deltoides WV94
Podel.01G392900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41552734-41562733 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426544 5262 Malpighiales View MSA
124248769 5268 Malvidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier