Gene : Podel.01G401100 P. deltoides WV94 v2.1

Defline:  (1 of 7) K00026 - malate dehydrogenase (MDH2) Genomic Order:  4011
Name:  ? Podel.01G401100 Secondary Identifier:  ? PAC:37309601

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 GLUCONEO-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 GLYOXYLATE-BYPASS Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5464 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-561 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5690 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY66-399 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-7115 Populus deltoides WV94 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.01G401100 0.5kb upstream 0.5kb upstream 4139 true Chr01: 42570374-42574512 Populus deltoides WV94
Podel.01G401100 0.5kb upstream 0.5kb upstream 500 false Chr01: 42574013-42574512 Populus deltoides WV94
Podel.01G401100 0.5kb downstream 0.5kb downstream 4139 true Chr01: 42569874-42574012 Populus deltoides WV94
Podel.01G401100 0.5kb downstream 0.5kb downstream 500 false Chr01: 42569874-42570373 Populus deltoides WV94
Podel.01G401100 1.0kb upstream 1.0kb upstream 4639 true Chr01: 42570374-42575012 Populus deltoides WV94
Podel.01G401100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42574013-42575012 Populus deltoides WV94
Podel.01G401100 1.0kb downstream 1.0kb downstream 4639 true Chr01: 42569374-42574012 Populus deltoides WV94
Podel.01G401100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42569374-42570373 Populus deltoides WV94
Podel.01G401100 2.0kb upstream 2.0kb upstream 5639 true Chr01: 42570374-42576012 Populus deltoides WV94
Podel.01G401100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42574013-42576012 Populus deltoides WV94
Podel.01G401100 2.0kb downstream 2.0kb downstream 5639 true Chr01: 42568374-42574012 Populus deltoides WV94
Podel.01G401100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42568374-42570373 Populus deltoides WV94
Podel.01G401100 5.0kb upstream 5.0kb upstream 8639 true Chr01: 42570374-42579012 Populus deltoides WV94
Podel.01G401100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42574013-42579012 Populus deltoides WV94
Podel.01G401100 5.0kb downstream 5.0kb downstream 8639 true Chr01: 42565374-42574012 Populus deltoides WV94
Podel.01G401100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42565374-42570373 Populus deltoides WV94
Podel.01G401100 10.0kb upstream 10.0kb upstream 13639 true Chr01: 42570374-42584012 Populus deltoides WV94
Podel.01G401100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42574013-42584012 Populus deltoides WV94
Podel.01G401100 10.0kb downstream 10.0kb downstream 13639 true Chr01: 42560374-42574012 Populus deltoides WV94
Podel.01G401100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42560374-42570373 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459554 5262 Malpighiales View MSA
124249329 5268 Malvidae View MSA
124072115 5270 Rosid View MSA
123744980 5271 Pentapetalae View MSA
122794194 5272 Eudicot View MSA
122042635 5273 Angiosperm View MSA
121345492 5274 Embryophyte View MSA
123423974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier