Gene : Podel.10G016200 P. deltoides WV94 v2.1
Defline:  (1 of 5) K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) Genomic Order:  162
Name:  ? Podel.10G016200 Secondary Identifier:  ? PAC:37339346
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 ARO-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-6163 Populus deltoides WV94 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.10G016200 0.5kb upstream 0.5kb upstream 9895 true Chr10: 2784478-2794372 Populus deltoides WV94
Podel.10G016200 0.5kb upstream 0.5kb upstream 500 false Chr10: 2793873-2794372 Populus deltoides WV94
Podel.10G016200 0.5kb downstream 0.5kb downstream 9895 true Chr10: 2783978-2793872 Populus deltoides WV94
Podel.10G016200 0.5kb downstream 0.5kb downstream 500 false Chr10: 2783978-2784477 Populus deltoides WV94
Podel.10G016200 1.0kb upstream 1.0kb upstream 10395 true Chr10: 2784478-2794872 Populus deltoides WV94
Podel.10G016200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2793873-2794872 Populus deltoides WV94
Podel.10G016200 1.0kb downstream 1.0kb downstream 10395 true Chr10: 2783478-2793872 Populus deltoides WV94
Podel.10G016200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2783478-2784477 Populus deltoides WV94
Podel.10G016200 2.0kb upstream 2.0kb upstream 11395 true Chr10: 2784478-2795872 Populus deltoides WV94
Podel.10G016200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2793873-2795872 Populus deltoides WV94
Podel.10G016200 2.0kb downstream 2.0kb downstream 11395 true Chr10: 2782478-2793872 Populus deltoides WV94
Podel.10G016200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2782478-2784477 Populus deltoides WV94
Podel.10G016200 5.0kb upstream 5.0kb upstream 14395 true Chr10: 2784478-2798872 Populus deltoides WV94
Podel.10G016200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2793873-2798872 Populus deltoides WV94
Podel.10G016200 5.0kb downstream 5.0kb downstream 14395 true Chr10: 2779478-2793872 Populus deltoides WV94
Podel.10G016200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2779478-2784477 Populus deltoides WV94
Podel.10G016200 10.0kb upstream 10.0kb upstream 19395 true Chr10: 2784478-2803872 Populus deltoides WV94
Podel.10G016200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2793873-2803872 Populus deltoides WV94
Podel.10G016200 10.0kb downstream 10.0kb downstream 19395 true Chr10: 2774478-2793872 Populus deltoides WV94
Podel.10G016200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2774478-2784477 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451145 5262 Malpighiales View MSA
124242776 5268 Malvidae View MSA
124068153 5270 Rosid View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier