Gene : Podel.10G233100 P. deltoides WV94 v2.1
Defline:  (1 of 3) K11450 - lysine-specific histone demethylase 1 [EC:1.-.-.-] (AOF2, LSD1) Genomic Order:  2331
Name:  ? Podel.10G233100 Secondary Identifier:  ? PAC:37336982
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-6441 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.10G233100 0.5kb upstream 0.5kb upstream 5176 true Chr10: 20164823-20169998 Populus deltoides WV94
Podel.10G233100 0.5kb upstream 0.5kb upstream 500 false Chr10: 20164823-20165322 Populus deltoides WV94
Podel.10G233100 0.5kb downstream 0.5kb downstream 5176 true Chr10: 20165323-20170498 Populus deltoides WV94
Podel.10G233100 0.5kb downstream 0.5kb downstream 500 false Chr10: 20169999-20170498 Populus deltoides WV94
Podel.10G233100 1.0kb upstream 1.0kb upstream 5676 true Chr10: 20164323-20169998 Populus deltoides WV94
Podel.10G233100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 20164323-20165322 Populus deltoides WV94
Podel.10G233100 1.0kb downstream 1.0kb downstream 5676 true Chr10: 20165323-20170998 Populus deltoides WV94
Podel.10G233100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 20169999-20170998 Populus deltoides WV94
Podel.10G233100 2.0kb upstream 2.0kb upstream 6676 true Chr10: 20163323-20169998 Populus deltoides WV94
Podel.10G233100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 20163323-20165322 Populus deltoides WV94
Podel.10G233100 2.0kb downstream 2.0kb downstream 6676 true Chr10: 20165323-20171998 Populus deltoides WV94
Podel.10G233100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 20169999-20171998 Populus deltoides WV94
Podel.10G233100 5.0kb upstream 5.0kb upstream 9676 true Chr10: 20160323-20169998 Populus deltoides WV94
Podel.10G233100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 20160323-20165322 Populus deltoides WV94
Podel.10G233100 5.0kb downstream 5.0kb downstream 9676 true Chr10: 20165323-20174998 Populus deltoides WV94
Podel.10G233100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 20169999-20174998 Populus deltoides WV94
Podel.10G233100 10.0kb upstream 10.0kb upstream 14676 true Chr10: 20155323-20169998 Populus deltoides WV94
Podel.10G233100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 20155323-20165322 Populus deltoides WV94
Podel.10G233100 10.0kb downstream 10.0kb downstream 14676 true Chr10: 20165323-20179998 Populus deltoides WV94
Podel.10G233100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 20169999-20179998 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453746 5262 Malpighiales View MSA
124237182 5268 Malvidae View MSA
124068541 5270 Rosid View MSA
123736657 5271 Pentapetalae View MSA
122791898 5272 Eudicot View MSA
122046966 5273 Angiosperm View MSA
121350960 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier