Gene : Podel.16G066200 P. deltoides WV94 v2.1

Defline:  (1 of 2) PTHR14969:SF3 - DIHYDROSPHINGOSINE 1-PHOSPHATE PHOSPHATASE LCB3-RELATED Genomic Order:  662
Name:  ? Podel.16G066200 Secondary Identifier:  ? PAC:37300523

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 TRIGLSYN-PWY Populus deltoides WV94 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.16G066200 0.5kb upstream 0.5kb upstream 4998 true Chr16: 4717713-4722710 Populus deltoides WV94
Podel.16G066200 0.5kb upstream 0.5kb upstream 500 false Chr16: 4722211-4722710 Populus deltoides WV94
Podel.16G066200 0.5kb downstream 0.5kb downstream 4998 true Chr16: 4717213-4722210 Populus deltoides WV94
Podel.16G066200 0.5kb downstream 0.5kb downstream 500 false Chr16: 4717213-4717712 Populus deltoides WV94
Podel.16G066200 1.0kb upstream 1.0kb upstream 5498 true Chr16: 4717713-4723210 Populus deltoides WV94
Podel.16G066200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4722211-4723210 Populus deltoides WV94
Podel.16G066200 1.0kb downstream 1.0kb downstream 5498 true Chr16: 4716713-4722210 Populus deltoides WV94
Podel.16G066200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4716713-4717712 Populus deltoides WV94
Podel.16G066200 2.0kb upstream 2.0kb upstream 6498 true Chr16: 4717713-4724210 Populus deltoides WV94
Podel.16G066200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4722211-4724210 Populus deltoides WV94
Podel.16G066200 2.0kb downstream 2.0kb downstream 6498 true Chr16: 4715713-4722210 Populus deltoides WV94
Podel.16G066200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4715713-4717712 Populus deltoides WV94
Podel.16G066200 5.0kb upstream 5.0kb upstream 9498 true Chr16: 4717713-4727210 Populus deltoides WV94
Podel.16G066200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4722211-4727210 Populus deltoides WV94
Podel.16G066200 5.0kb downstream 5.0kb downstream 9498 true Chr16: 4712713-4722210 Populus deltoides WV94
Podel.16G066200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4712713-4717712 Populus deltoides WV94
Podel.16G066200 10.0kb upstream 10.0kb upstream 14498 true Chr16: 4717713-4732210 Populus deltoides WV94
Podel.16G066200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4722211-4732210 Populus deltoides WV94
Podel.16G066200 10.0kb downstream 10.0kb downstream 14498 true Chr16: 4707713-4722210 Populus deltoides WV94
Podel.16G066200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4707713-4717712 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453076 5262 Malpighiales View MSA
124241602 5268 Malvidae View MSA
124061101 5270 Rosid View MSA
123739708 5271 Pentapetalae View MSA
122787223 5272 Eudicot View MSA
122041787 5273 Angiosperm View MSA
121351488 5274 Embryophyte View MSA
123382186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier