Gene : Podel.16G144300 P. deltoides WV94 v2.1

Defline:  (1 of 4) K02730 - 20S proteasome subunit alpha 1 (PSMA6) Genomic Order:  1443
Name:  ? Podel.16G144300 Secondary Identifier:  ? PAC:37300121

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.16G144300 0.5kb upstream 0.5kb upstream 3913 true Chr16: 14297189-14301101 Populus deltoides WV94
Podel.16G144300 0.5kb upstream 0.5kb upstream 500 false Chr16: 14297189-14297688 Populus deltoides WV94
Podel.16G144300 0.5kb downstream 0.5kb downstream 3913 true Chr16: 14297689-14301601 Populus deltoides WV94
Podel.16G144300 0.5kb downstream 0.5kb downstream 500 false Chr16: 14301102-14301601 Populus deltoides WV94
Podel.16G144300 1.0kb upstream 1.0kb upstream 4413 true Chr16: 14296689-14301101 Populus deltoides WV94
Podel.16G144300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 14296689-14297688 Populus deltoides WV94
Podel.16G144300 1.0kb downstream 1.0kb downstream 4413 true Chr16: 14297689-14302101 Populus deltoides WV94
Podel.16G144300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 14301102-14302101 Populus deltoides WV94
Podel.16G144300 2.0kb upstream 2.0kb upstream 5413 true Chr16: 14295689-14301101 Populus deltoides WV94
Podel.16G144300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 14295689-14297688 Populus deltoides WV94
Podel.16G144300 2.0kb downstream 2.0kb downstream 5413 true Chr16: 14297689-14303101 Populus deltoides WV94
Podel.16G144300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 14301102-14303101 Populus deltoides WV94
Podel.16G144300 5.0kb upstream 5.0kb upstream 8413 true Chr16: 14292689-14301101 Populus deltoides WV94
Podel.16G144300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 14292689-14297688 Populus deltoides WV94
Podel.16G144300 5.0kb downstream 5.0kb downstream 8413 true Chr16: 14297689-14306101 Populus deltoides WV94
Podel.16G144300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 14301102-14306101 Populus deltoides WV94
Podel.16G144300 10.0kb upstream 10.0kb upstream 13413 true Chr16: 14287689-14301101 Populus deltoides WV94
Podel.16G144300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 14287689-14297688 Populus deltoides WV94
Podel.16G144300 10.0kb downstream 10.0kb downstream 13413 true Chr16: 14297689-14311101 Populus deltoides WV94
Podel.16G144300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 14301102-14311101 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041382 5273 Angiosperm View MSA
122414282 5262 Malpighiales View MSA
124207569 5268 Malvidae View MSA
123926221 5270 Rosid View MSA
123742081 5271 Pentapetalae View MSA
122789367 5272 Eudicot View MSA
121345997 5274 Embryophyte View MSA
123424581 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier