Gene : PGSC0003DMG400010859 S. tuberosum v4.03
Defline:  (1 of 6) K15718 - linoleate 9S-lipoxygenase (LOX1_5) Genomic Order:  787
Name:  ? PGSC0003DMG400010859 Secondary Identifier:  ? PAC:37470554
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-5406 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400010859 0.5kb upstream 0.5kb upstream 4424 true ST4.03ch08: 17826814-17831237 Solanum tuberosum
PGSC0003DMG400010859 0.5kb upstream 0.5kb upstream 500 false ST4.03ch08: 17826814-17827313 Solanum tuberosum
PGSC0003DMG400010859 0.5kb downstream 0.5kb downstream 4424 true ST4.03ch08: 17827314-17831737 Solanum tuberosum
PGSC0003DMG400010859 0.5kb downstream 0.5kb downstream 500 false ST4.03ch08: 17831238-17831737 Solanum tuberosum
PGSC0003DMG400010859 1.0kb upstream 1.0kb upstream 4924 true ST4.03ch08: 17826314-17831237 Solanum tuberosum
PGSC0003DMG400010859 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch08: 17826314-17827313 Solanum tuberosum
PGSC0003DMG400010859 1.0kb downstream 1.0kb downstream 4924 true ST4.03ch08: 17827314-17832237 Solanum tuberosum
PGSC0003DMG400010859 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch08: 17831238-17832237 Solanum tuberosum
PGSC0003DMG400010859 2.0kb upstream 2.0kb upstream 5924 true ST4.03ch08: 17825314-17831237 Solanum tuberosum
PGSC0003DMG400010859 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch08: 17825314-17827313 Solanum tuberosum
PGSC0003DMG400010859 2.0kb downstream 2.0kb downstream 5924 true ST4.03ch08: 17827314-17833237 Solanum tuberosum
PGSC0003DMG400010859 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch08: 17831238-17833237 Solanum tuberosum
PGSC0003DMG400010859 5.0kb upstream 5.0kb upstream 8924 true ST4.03ch08: 17822314-17831237 Solanum tuberosum
PGSC0003DMG400010859 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch08: 17822314-17827313 Solanum tuberosum
PGSC0003DMG400010859 5.0kb downstream 5.0kb downstream 8924 true ST4.03ch08: 17827314-17836237 Solanum tuberosum
PGSC0003DMG400010859 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch08: 17831238-17836237 Solanum tuberosum
PGSC0003DMG400010859 10.0kb upstream 10.0kb upstream 13924 true ST4.03ch08: 17817314-17831237 Solanum tuberosum
PGSC0003DMG400010859 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch08: 17817314-17827313 Solanum tuberosum
PGSC0003DMG400010859 10.0kb downstream 10.0kb downstream 13924 true ST4.03ch08: 17827314-17841237 Solanum tuberosum
PGSC0003DMG400010859 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch08: 17831238-17841237 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122793975 5272 Eudicot View MSA
121479154 5263 Asterids View MSA
123743828 5271 Pentapetalae View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain