Gene : PGSC0003DMG400035655 S. tuberosum v4.03
Defline:  Integrase core domain containing protein Genomic Order:  932
Name:  ? PGSC0003DMG400035655 Secondary Identifier:  ? PAC:37471105
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400035655 0.5kb upstream 0.5kb upstream 2099 true ST4.03ch08: 22714449-22716547 Solanum tuberosum
PGSC0003DMG400035655 0.5kb upstream 0.5kb upstream 500 false ST4.03ch08: 22716048-22716547 Solanum tuberosum
PGSC0003DMG400035655 0.5kb downstream 0.5kb downstream 2099 true ST4.03ch08: 22713949-22716047 Solanum tuberosum
PGSC0003DMG400035655 0.5kb downstream 0.5kb downstream 500 false ST4.03ch08: 22713949-22714448 Solanum tuberosum
PGSC0003DMG400035655 1.0kb upstream 1.0kb upstream 2599 true ST4.03ch08: 22714449-22717047 Solanum tuberosum
PGSC0003DMG400035655 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch08: 22716048-22717047 Solanum tuberosum
PGSC0003DMG400035655 1.0kb downstream 1.0kb downstream 2599 true ST4.03ch08: 22713449-22716047 Solanum tuberosum
PGSC0003DMG400035655 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch08: 22713449-22714448 Solanum tuberosum
PGSC0003DMG400035655 2.0kb upstream 2.0kb upstream 3599 true ST4.03ch08: 22714449-22718047 Solanum tuberosum
PGSC0003DMG400035655 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch08: 22716048-22718047 Solanum tuberosum
PGSC0003DMG400035655 2.0kb downstream 2.0kb downstream 3599 true ST4.03ch08: 22712449-22716047 Solanum tuberosum
PGSC0003DMG400035655 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch08: 22712449-22714448 Solanum tuberosum
PGSC0003DMG400035655 5.0kb upstream 5.0kb upstream 6599 true ST4.03ch08: 22714449-22721047 Solanum tuberosum
PGSC0003DMG400035655 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch08: 22716048-22721047 Solanum tuberosum
PGSC0003DMG400035655 5.0kb downstream 5.0kb downstream 6599 true ST4.03ch08: 22709449-22716047 Solanum tuberosum
PGSC0003DMG400035655 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch08: 22709449-22714448 Solanum tuberosum
PGSC0003DMG400035655 10.0kb upstream 10.0kb upstream 11599 true ST4.03ch08: 22714449-22726047 Solanum tuberosum
PGSC0003DMG400035655 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch08: 22716048-22726047 Solanum tuberosum
PGSC0003DMG400035655 10.0kb downstream 10.0kb downstream 11599 true ST4.03ch08: 22704449-22716047 Solanum tuberosum
PGSC0003DMG400035655 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch08: 22704449-22714448 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121711558 5273 Angiosperm View MSA
121386642 5263 Asterids View MSA
123668023 5271 Pentapetalae View MSA
122701926 5272 Eudicot View MSA
120983313 5274 Embryophyte View MSA
123023533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain