Gene : PGSC0003DMG400030158 S. tuberosum v4.03
Defline:  (1 of 2) PTHR11712//PTHR11712:SF226 - POLYKETIDE SYNTHASE-RELATED // 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, CHLOROPLASTIC Genomic Order:  563
Name:  ? PGSC0003DMG400030158 Secondary Identifier:  ? PAC:37468638
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum FASYN-ELONG-PWY Solanum tuberosum pathologic  
Stuberosum PWY-5156 Solanum tuberosum pathologic  
Stuberosum PWY-5971 Solanum tuberosum pathologic  
Stuberosum PWY-5989 Solanum tuberosum pathologic  
Stuberosum PWY-6282 Solanum tuberosum pathologic  
Stuberosum PWY-7388 Solanum tuberosum pathologic  
Stuberosum PWY-7663 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400030158 0.5kb upstream 0.5kb upstream 9308 true ST4.03ch08: 9550147-9559454 Solanum tuberosum
PGSC0003DMG400030158 0.5kb upstream 0.5kb upstream 500 false ST4.03ch08: 9550147-9550646 Solanum tuberosum
PGSC0003DMG400030158 0.5kb downstream 0.5kb downstream 9308 true ST4.03ch08: 9550647-9559954 Solanum tuberosum
PGSC0003DMG400030158 0.5kb downstream 0.5kb downstream 500 false ST4.03ch08: 9559455-9559954 Solanum tuberosum
PGSC0003DMG400030158 1.0kb upstream 1.0kb upstream 9808 true ST4.03ch08: 9549647-9559454 Solanum tuberosum
PGSC0003DMG400030158 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch08: 9549647-9550646 Solanum tuberosum
PGSC0003DMG400030158 1.0kb downstream 1.0kb downstream 9808 true ST4.03ch08: 9550647-9560454 Solanum tuberosum
PGSC0003DMG400030158 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch08: 9559455-9560454 Solanum tuberosum
PGSC0003DMG400030158 2.0kb upstream 2.0kb upstream 10808 true ST4.03ch08: 9548647-9559454 Solanum tuberosum
PGSC0003DMG400030158 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch08: 9548647-9550646 Solanum tuberosum
PGSC0003DMG400030158 2.0kb downstream 2.0kb downstream 10808 true ST4.03ch08: 9550647-9561454 Solanum tuberosum
PGSC0003DMG400030158 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch08: 9559455-9561454 Solanum tuberosum
PGSC0003DMG400030158 5.0kb upstream 5.0kb upstream 13808 true ST4.03ch08: 9545647-9559454 Solanum tuberosum
PGSC0003DMG400030158 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch08: 9545647-9550646 Solanum tuberosum
PGSC0003DMG400030158 5.0kb downstream 5.0kb downstream 13808 true ST4.03ch08: 9550647-9564454 Solanum tuberosum
PGSC0003DMG400030158 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch08: 9559455-9564454 Solanum tuberosum
PGSC0003DMG400030158 10.0kb upstream 10.0kb upstream 18808 true ST4.03ch08: 9540647-9559454 Solanum tuberosum
PGSC0003DMG400030158 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch08: 9540647-9550646 Solanum tuberosum
PGSC0003DMG400030158 10.0kb downstream 10.0kb downstream 18808 true ST4.03ch08: 9550647-9569454 Solanum tuberosum
PGSC0003DMG400030158 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch08: 9559455-9569454 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479395 5263 Asterids View MSA
123747178 5271 Pentapetalae View MSA
122792015 5272 Eudicot View MSA
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain