Gene : PGSC0003DMG402001159 S. tuberosum v4.03

Defline:  (1 of 7) PF02517 - CAAX protease self-immunity (Abi) Genomic Order:  337
Name:  ? PGSC0003DMG402001159 Secondary Identifier:  ? PAC:37470038

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG402001159 0.5kb upstream 0.5kb upstream 5937 true ST4.03ch08: 4455754-4461690 Solanum tuberosum
PGSC0003DMG402001159 0.5kb upstream 0.5kb upstream 500 false ST4.03ch08: 4455754-4456253 Solanum tuberosum
PGSC0003DMG402001159 0.5kb downstream 0.5kb downstream 5937 true ST4.03ch08: 4456254-4462190 Solanum tuberosum
PGSC0003DMG402001159 0.5kb downstream 0.5kb downstream 500 false ST4.03ch08: 4461691-4462190 Solanum tuberosum
PGSC0003DMG402001159 1.0kb upstream 1.0kb upstream 6437 true ST4.03ch08: 4455254-4461690 Solanum tuberosum
PGSC0003DMG402001159 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch08: 4455254-4456253 Solanum tuberosum
PGSC0003DMG402001159 1.0kb downstream 1.0kb downstream 6437 true ST4.03ch08: 4456254-4462690 Solanum tuberosum
PGSC0003DMG402001159 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch08: 4461691-4462690 Solanum tuberosum
PGSC0003DMG402001159 2.0kb upstream 2.0kb upstream 7437 true ST4.03ch08: 4454254-4461690 Solanum tuberosum
PGSC0003DMG402001159 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch08: 4454254-4456253 Solanum tuberosum
PGSC0003DMG402001159 2.0kb downstream 2.0kb downstream 7437 true ST4.03ch08: 4456254-4463690 Solanum tuberosum
PGSC0003DMG402001159 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch08: 4461691-4463690 Solanum tuberosum
PGSC0003DMG402001159 5.0kb upstream 5.0kb upstream 10437 true ST4.03ch08: 4451254-4461690 Solanum tuberosum
PGSC0003DMG402001159 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch08: 4451254-4456253 Solanum tuberosum
PGSC0003DMG402001159 5.0kb downstream 5.0kb downstream 10437 true ST4.03ch08: 4456254-4466690 Solanum tuberosum
PGSC0003DMG402001159 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch08: 4461691-4466690 Solanum tuberosum
PGSC0003DMG402001159 10.0kb upstream 10.0kb upstream 15437 true ST4.03ch08: 4446254-4461690 Solanum tuberosum
PGSC0003DMG402001159 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch08: 4446254-4456253 Solanum tuberosum
PGSC0003DMG402001159 10.0kb downstream 10.0kb downstream 15437 true ST4.03ch08: 4456254-4471690 Solanum tuberosum
PGSC0003DMG402001159 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch08: 4461691-4471690 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466287 5263 Asterids View MSA
123746065 5271 Pentapetalae View MSA
122791545 5272 Eudicot View MSA
122045418 5273 Angiosperm View MSA
121347772 5274 Embryophyte View MSA
123380622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain