Gene : PGSC0003DMG400008939 S. tuberosum v4.03
Defline:  (1 of 1) PTHR23083//PTHR23083:SF397 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED Genomic Order:  243
Name:  ? PGSC0003DMG400008939 Secondary Identifier:  ? PAC:37457874
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-7437 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400008939 0.5kb upstream 0.5kb upstream 14626 true ST4.03ch09: 2376655-2391280 Solanum tuberosum
PGSC0003DMG400008939 0.5kb upstream 0.5kb upstream 500 false ST4.03ch09: 2390781-2391280 Solanum tuberosum
PGSC0003DMG400008939 0.5kb downstream 0.5kb downstream 14626 true ST4.03ch09: 2376155-2390780 Solanum tuberosum
PGSC0003DMG400008939 0.5kb downstream 0.5kb downstream 500 false ST4.03ch09: 2376155-2376654 Solanum tuberosum
PGSC0003DMG400008939 1.0kb upstream 1.0kb upstream 15126 true ST4.03ch09: 2376655-2391780 Solanum tuberosum
PGSC0003DMG400008939 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch09: 2390781-2391780 Solanum tuberosum
PGSC0003DMG400008939 1.0kb downstream 1.0kb downstream 15126 true ST4.03ch09: 2375655-2390780 Solanum tuberosum
PGSC0003DMG400008939 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch09: 2375655-2376654 Solanum tuberosum
PGSC0003DMG400008939 2.0kb upstream 2.0kb upstream 16126 true ST4.03ch09: 2376655-2392780 Solanum tuberosum
PGSC0003DMG400008939 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch09: 2390781-2392780 Solanum tuberosum
PGSC0003DMG400008939 2.0kb downstream 2.0kb downstream 16126 true ST4.03ch09: 2374655-2390780 Solanum tuberosum
PGSC0003DMG400008939 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch09: 2374655-2376654 Solanum tuberosum
PGSC0003DMG400008939 5.0kb upstream 5.0kb upstream 19126 true ST4.03ch09: 2376655-2395780 Solanum tuberosum
PGSC0003DMG400008939 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch09: 2390781-2395780 Solanum tuberosum
PGSC0003DMG400008939 5.0kb downstream 5.0kb downstream 19126 true ST4.03ch09: 2371655-2390780 Solanum tuberosum
PGSC0003DMG400008939 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch09: 2371655-2376654 Solanum tuberosum
PGSC0003DMG400008939 10.0kb upstream 10.0kb upstream 24126 true ST4.03ch09: 2376655-2400780 Solanum tuberosum
PGSC0003DMG400008939 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch09: 2390781-2400780 Solanum tuberosum
PGSC0003DMG400008939 10.0kb downstream 10.0kb downstream 24126 true ST4.03ch09: 2366655-2390780 Solanum tuberosum
PGSC0003DMG400008939 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch09: 2366655-2376654 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471606 5263 Asterids View MSA
123739134 5271 Pentapetalae View MSA
122791595 5272 Eudicot View MSA
122044417 5273 Angiosperm View MSA
121347707 5274 Embryophyte View MSA
123428836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain