Gene : PGSC0003DMG400008311 S. tuberosum v4.03
Defline:  (1 of 2) PTHR11712//PTHR11712:SF226 - POLYKETIDE SYNTHASE-RELATED // 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, CHLOROPLASTIC Genomic Order:  1354
Name:  ? PGSC0003DMG400008311 Secondary Identifier:  ? PAC:37428870
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum FASYN-ELONG-PWY Solanum tuberosum pathologic  
Stuberosum PWY-5156 Solanum tuberosum pathologic  
Stuberosum PWY-5971 Solanum tuberosum pathologic  
Stuberosum PWY-5989 Solanum tuberosum pathologic  
Stuberosum PWY-6282 Solanum tuberosum pathologic  
Stuberosum PWY-7388 Solanum tuberosum pathologic  
Stuberosum PWY-7663 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400008311 0.5kb upstream 0.5kb upstream 4438 true ST4.03ch02: 29951481-29955918 Solanum tuberosum
PGSC0003DMG400008311 0.5kb upstream 0.5kb upstream 500 false ST4.03ch02: 29955419-29955918 Solanum tuberosum
PGSC0003DMG400008311 0.5kb downstream 0.5kb downstream 4438 true ST4.03ch02: 29950981-29955418 Solanum tuberosum
PGSC0003DMG400008311 0.5kb downstream 0.5kb downstream 500 false ST4.03ch02: 29950981-29951480 Solanum tuberosum
PGSC0003DMG400008311 1.0kb upstream 1.0kb upstream 4938 true ST4.03ch02: 29951481-29956418 Solanum tuberosum
PGSC0003DMG400008311 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch02: 29955419-29956418 Solanum tuberosum
PGSC0003DMG400008311 1.0kb downstream 1.0kb downstream 4938 true ST4.03ch02: 29950481-29955418 Solanum tuberosum
PGSC0003DMG400008311 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch02: 29950481-29951480 Solanum tuberosum
PGSC0003DMG400008311 2.0kb upstream 2.0kb upstream 5938 true ST4.03ch02: 29951481-29957418 Solanum tuberosum
PGSC0003DMG400008311 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch02: 29955419-29957418 Solanum tuberosum
PGSC0003DMG400008311 2.0kb downstream 2.0kb downstream 5938 true ST4.03ch02: 29949481-29955418 Solanum tuberosum
PGSC0003DMG400008311 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch02: 29949481-29951480 Solanum tuberosum
PGSC0003DMG400008311 5.0kb upstream 5.0kb upstream 8938 true ST4.03ch02: 29951481-29960418 Solanum tuberosum
PGSC0003DMG400008311 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch02: 29955419-29960418 Solanum tuberosum
PGSC0003DMG400008311 5.0kb downstream 5.0kb downstream 8938 true ST4.03ch02: 29946481-29955418 Solanum tuberosum
PGSC0003DMG400008311 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch02: 29946481-29951480 Solanum tuberosum
PGSC0003DMG400008311 10.0kb upstream 10.0kb upstream 13938 true ST4.03ch02: 29951481-29965418 Solanum tuberosum
PGSC0003DMG400008311 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch02: 29955419-29965418 Solanum tuberosum
PGSC0003DMG400008311 10.0kb downstream 10.0kb downstream 13938 true ST4.03ch02: 29941481-29955418 Solanum tuberosum
PGSC0003DMG400008311 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch02: 29941481-29951480 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479395 5263 Asterids View MSA
123747178 5271 Pentapetalae View MSA
122792015 5272 Eudicot View MSA
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain