Gene : PGSC0003DMG400028888 S. tuberosum v4.03
Defline:  (1 of 2) PTHR11771//PTHR11771:SF59 - LIPOXYGENASE // SUBFAMILY NOT NAMED Genomic Order:  1220
Name:  ? PGSC0003DMG400028888 Secondary Identifier:  ? PAC:37456164
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-5406 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400028888 0.5kb upstream 0.5kb upstream 1854 true ST4.03ch09: 26423571-26425424 Solanum tuberosum
PGSC0003DMG400028888 0.5kb upstream 0.5kb upstream 500 false ST4.03ch09: 26424925-26425424 Solanum tuberosum
PGSC0003DMG400028888 0.5kb downstream 0.5kb downstream 1854 true ST4.03ch09: 26423071-26424924 Solanum tuberosum
PGSC0003DMG400028888 0.5kb downstream 0.5kb downstream 500 false ST4.03ch09: 26423071-26423570 Solanum tuberosum
PGSC0003DMG400028888 1.0kb upstream 1.0kb upstream 2354 true ST4.03ch09: 26423571-26425924 Solanum tuberosum
PGSC0003DMG400028888 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch09: 26424925-26425924 Solanum tuberosum
PGSC0003DMG400028888 1.0kb downstream 1.0kb downstream 2354 true ST4.03ch09: 26422571-26424924 Solanum tuberosum
PGSC0003DMG400028888 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch09: 26422571-26423570 Solanum tuberosum
PGSC0003DMG400028888 2.0kb upstream 2.0kb upstream 3354 true ST4.03ch09: 26423571-26426924 Solanum tuberosum
PGSC0003DMG400028888 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch09: 26424925-26426924 Solanum tuberosum
PGSC0003DMG400028888 2.0kb downstream 2.0kb downstream 3354 true ST4.03ch09: 26421571-26424924 Solanum tuberosum
PGSC0003DMG400028888 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch09: 26421571-26423570 Solanum tuberosum
PGSC0003DMG400028888 5.0kb upstream 5.0kb upstream 6354 true ST4.03ch09: 26423571-26429924 Solanum tuberosum
PGSC0003DMG400028888 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch09: 26424925-26429924 Solanum tuberosum
PGSC0003DMG400028888 5.0kb downstream 5.0kb downstream 6354 true ST4.03ch09: 26418571-26424924 Solanum tuberosum
PGSC0003DMG400028888 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch09: 26418571-26423570 Solanum tuberosum
PGSC0003DMG400028888 10.0kb upstream 10.0kb upstream 11354 true ST4.03ch09: 26423571-26434924 Solanum tuberosum
PGSC0003DMG400028888 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch09: 26424925-26434924 Solanum tuberosum
PGSC0003DMG400028888 10.0kb downstream 10.0kb downstream 11354 true ST4.03ch09: 26413571-26424924 Solanum tuberosum
PGSC0003DMG400028888 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch09: 26413571-26423570 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121387736 5263 Asterids View MSA
123750052 5271 Pentapetalae View MSA
122773445 5272 Eudicot View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain