Gene : PGSC0003DMG400006977 S. tuberosum v4.03

Defline:  (1 of 2) PTHR10857//PTHR10857:SF43 - COPINE // SUBFAMILY NOT NAMED Genomic Order:  1065
Name:  ? PGSC0003DMG400006977 Secondary Identifier:  ? PAC:37425937

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400006977 0.5kb upstream 0.5kb upstream 4023 true ST4.03ch02: 26778920-26782942 Solanum tuberosum
PGSC0003DMG400006977 0.5kb upstream 0.5kb upstream 500 false ST4.03ch02: 26782443-26782942 Solanum tuberosum
PGSC0003DMG400006977 0.5kb downstream 0.5kb downstream 4023 true ST4.03ch02: 26778420-26782442 Solanum tuberosum
PGSC0003DMG400006977 0.5kb downstream 0.5kb downstream 500 false ST4.03ch02: 26778420-26778919 Solanum tuberosum
PGSC0003DMG400006977 1.0kb upstream 1.0kb upstream 4523 true ST4.03ch02: 26778920-26783442 Solanum tuberosum
PGSC0003DMG400006977 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch02: 26782443-26783442 Solanum tuberosum
PGSC0003DMG400006977 1.0kb downstream 1.0kb downstream 4523 true ST4.03ch02: 26777920-26782442 Solanum tuberosum
PGSC0003DMG400006977 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch02: 26777920-26778919 Solanum tuberosum
PGSC0003DMG400006977 2.0kb upstream 2.0kb upstream 5523 true ST4.03ch02: 26778920-26784442 Solanum tuberosum
PGSC0003DMG400006977 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch02: 26782443-26784442 Solanum tuberosum
PGSC0003DMG400006977 2.0kb downstream 2.0kb downstream 5523 true ST4.03ch02: 26776920-26782442 Solanum tuberosum
PGSC0003DMG400006977 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch02: 26776920-26778919 Solanum tuberosum
PGSC0003DMG400006977 5.0kb upstream 5.0kb upstream 8523 true ST4.03ch02: 26778920-26787442 Solanum tuberosum
PGSC0003DMG400006977 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch02: 26782443-26787442 Solanum tuberosum
PGSC0003DMG400006977 5.0kb downstream 5.0kb downstream 8523 true ST4.03ch02: 26773920-26782442 Solanum tuberosum
PGSC0003DMG400006977 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch02: 26773920-26778919 Solanum tuberosum
PGSC0003DMG400006977 10.0kb upstream 10.0kb upstream 13523 true ST4.03ch02: 26778920-26792442 Solanum tuberosum
PGSC0003DMG400006977 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch02: 26782443-26792442 Solanum tuberosum
PGSC0003DMG400006977 10.0kb downstream 10.0kb downstream 13523 true ST4.03ch02: 26768920-26782442 Solanum tuberosum
PGSC0003DMG400006977 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch02: 26768920-26778919 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480777 5263 Asterids View MSA
123750755 5271 Pentapetalae View MSA
122796494 5272 Eudicot View MSA
122041662 5273 Angiosperm View MSA
121346693 5274 Embryophyte View MSA
123380427 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain