Gene : PGSC0003DMG400010352 S. tuberosum v4.03
Defline:  (1 of 1) PTHR11440//PTHR11440:SF3 - LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED // LECITHIN-CHOLESTEROL ACYLTRANSFERASE-LIKE 4 Genomic Order:  1162
Name:  ? PGSC0003DMG400010352 Secondary Identifier:  ? PAC:37424381
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum LIPASYN-PWY Solanum tuberosum pathologic  
Stuberosum PWY-6803 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400010352 0.5kb upstream 0.5kb upstream 8838 true ST4.03ch02: 27880096-27888933 Solanum tuberosum
PGSC0003DMG400010352 0.5kb upstream 0.5kb upstream 500 false ST4.03ch02: 27888434-27888933 Solanum tuberosum
PGSC0003DMG400010352 0.5kb downstream 0.5kb downstream 8838 true ST4.03ch02: 27879596-27888433 Solanum tuberosum
PGSC0003DMG400010352 0.5kb downstream 0.5kb downstream 500 false ST4.03ch02: 27879596-27880095 Solanum tuberosum
PGSC0003DMG400010352 1.0kb upstream 1.0kb upstream 9338 true ST4.03ch02: 27880096-27889433 Solanum tuberosum
PGSC0003DMG400010352 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch02: 27888434-27889433 Solanum tuberosum
PGSC0003DMG400010352 1.0kb downstream 1.0kb downstream 9338 true ST4.03ch02: 27879096-27888433 Solanum tuberosum
PGSC0003DMG400010352 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch02: 27879096-27880095 Solanum tuberosum
PGSC0003DMG400010352 2.0kb upstream 2.0kb upstream 10338 true ST4.03ch02: 27880096-27890433 Solanum tuberosum
PGSC0003DMG400010352 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch02: 27888434-27890433 Solanum tuberosum
PGSC0003DMG400010352 2.0kb downstream 2.0kb downstream 10338 true ST4.03ch02: 27878096-27888433 Solanum tuberosum
PGSC0003DMG400010352 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch02: 27878096-27880095 Solanum tuberosum
PGSC0003DMG400010352 5.0kb upstream 5.0kb upstream 13338 true ST4.03ch02: 27880096-27893433 Solanum tuberosum
PGSC0003DMG400010352 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch02: 27888434-27893433 Solanum tuberosum
PGSC0003DMG400010352 5.0kb downstream 5.0kb downstream 13338 true ST4.03ch02: 27875096-27888433 Solanum tuberosum
PGSC0003DMG400010352 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch02: 27875096-27880095 Solanum tuberosum
PGSC0003DMG400010352 10.0kb upstream 10.0kb upstream 18338 true ST4.03ch02: 27880096-27898433 Solanum tuberosum
PGSC0003DMG400010352 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch02: 27888434-27898433 Solanum tuberosum
PGSC0003DMG400010352 10.0kb downstream 10.0kb downstream 18338 true ST4.03ch02: 27870096-27888433 Solanum tuberosum
PGSC0003DMG400010352 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch02: 27870096-27880095 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041263 5273 Angiosperm View MSA
121473988 5263 Asterids View MSA
123744948 5271 Pentapetalae View MSA
122787673 5272 Eudicot View MSA
121345850 5274 Embryophyte View MSA
123380278 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain