Gene : PGSC0003DMG400011246 S. tuberosum v4.03
Defline:  (1 of 1) PTHR10836//PTHR10836:SF41 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE // GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPCP1, CHLOROPLASTIC-RELATED Genomic Order:  55
Name:  ? PGSC0003DMG400011246 Secondary Identifier:  ? PAC:37479962
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum ANAEROFRUCAT-PWY Solanum tuberosum pathologic  
Stuberosum ANAGLYCOLYSIS-PWY Solanum tuberosum pathologic  
Stuberosum GLUCONEO-PWY Solanum tuberosum pathologic  
Stuberosum PWY-1042 Solanum tuberosum pathologic  
Stuberosum PWY-5464 Solanum tuberosum pathologic  
Stuberosum SUCSYN-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400011246 0.5kb upstream 0.5kb upstream 5566 true ST4.03ch10: 591530-597095 Solanum tuberosum
PGSC0003DMG400011246 0.5kb upstream 0.5kb upstream 500 false ST4.03ch10: 596596-597095 Solanum tuberosum
PGSC0003DMG400011246 0.5kb downstream 0.5kb downstream 5566 true ST4.03ch10: 591030-596595 Solanum tuberosum
PGSC0003DMG400011246 0.5kb downstream 0.5kb downstream 500 false ST4.03ch10: 591030-591529 Solanum tuberosum
PGSC0003DMG400011246 1.0kb upstream 1.0kb upstream 6066 true ST4.03ch10: 591530-597595 Solanum tuberosum
PGSC0003DMG400011246 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch10: 596596-597595 Solanum tuberosum
PGSC0003DMG400011246 1.0kb downstream 1.0kb downstream 6066 true ST4.03ch10: 590530-596595 Solanum tuberosum
PGSC0003DMG400011246 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch10: 590530-591529 Solanum tuberosum
PGSC0003DMG400011246 2.0kb upstream 2.0kb upstream 7066 true ST4.03ch10: 591530-598595 Solanum tuberosum
PGSC0003DMG400011246 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch10: 596596-598595 Solanum tuberosum
PGSC0003DMG400011246 2.0kb downstream 2.0kb downstream 7066 true ST4.03ch10: 589530-596595 Solanum tuberosum
PGSC0003DMG400011246 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch10: 589530-591529 Solanum tuberosum
PGSC0003DMG400011246 5.0kb upstream 5.0kb upstream 10066 true ST4.03ch10: 591530-601595 Solanum tuberosum
PGSC0003DMG400011246 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch10: 596596-601595 Solanum tuberosum
PGSC0003DMG400011246 5.0kb downstream 5.0kb downstream 10066 true ST4.03ch10: 586530-596595 Solanum tuberosum
PGSC0003DMG400011246 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch10: 586530-591529 Solanum tuberosum
PGSC0003DMG400011246 10.0kb upstream 10.0kb upstream 15066 true ST4.03ch10: 591530-606595 Solanum tuberosum
PGSC0003DMG400011246 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch10: 596596-606595 Solanum tuberosum
PGSC0003DMG400011246 10.0kb downstream 10.0kb downstream 15066 true ST4.03ch10: 581530-596595 Solanum tuberosum
PGSC0003DMG400011246 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch10: 581530-591529 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468914 5263 Asterids View MSA
123738168 5271 Pentapetalae View MSA
122792653 5272 Eudicot View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain