Gene : PGSC0003DMG400011282 S. tuberosum v4.03
Defline:  (1 of 3) K01696 - tryptophan synthase beta chain (trpB) Genomic Order:  38
Name:  ? PGSC0003DMG400011282 Secondary Identifier:  ? PAC:37476531
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-6949 Solanum tuberosum pathologic  
Stuberosum TRPSYN-PWY Solanum tuberosum pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400011282 0.5kb upstream 0.5kb upstream 2870 true ST4.03ch10: 369544-372413 Solanum tuberosum
PGSC0003DMG400011282 0.5kb upstream 0.5kb upstream 500 false ST4.03ch10: 369544-370043 Solanum tuberosum
PGSC0003DMG400011282 0.5kb downstream 0.5kb downstream 2870 true ST4.03ch10: 370044-372913 Solanum tuberosum
PGSC0003DMG400011282 0.5kb downstream 0.5kb downstream 500 false ST4.03ch10: 372414-372913 Solanum tuberosum
PGSC0003DMG400011282 1.0kb upstream 1.0kb upstream 3370 true ST4.03ch10: 369044-372413 Solanum tuberosum
PGSC0003DMG400011282 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch10: 369044-370043 Solanum tuberosum
PGSC0003DMG400011282 1.0kb downstream 1.0kb downstream 3370 true ST4.03ch10: 370044-373413 Solanum tuberosum
PGSC0003DMG400011282 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch10: 372414-373413 Solanum tuberosum
PGSC0003DMG400011282 2.0kb upstream 2.0kb upstream 4370 true ST4.03ch10: 368044-372413 Solanum tuberosum
PGSC0003DMG400011282 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch10: 368044-370043 Solanum tuberosum
PGSC0003DMG400011282 2.0kb downstream 2.0kb downstream 4370 true ST4.03ch10: 370044-374413 Solanum tuberosum
PGSC0003DMG400011282 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch10: 372414-374413 Solanum tuberosum
PGSC0003DMG400011282 5.0kb upstream 5.0kb upstream 7370 true ST4.03ch10: 365044-372413 Solanum tuberosum
PGSC0003DMG400011282 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch10: 365044-370043 Solanum tuberosum
PGSC0003DMG400011282 5.0kb downstream 5.0kb downstream 7370 true ST4.03ch10: 370044-377413 Solanum tuberosum
PGSC0003DMG400011282 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch10: 372414-377413 Solanum tuberosum
PGSC0003DMG400011282 10.0kb upstream 10.0kb upstream 12370 true ST4.03ch10: 360044-372413 Solanum tuberosum
PGSC0003DMG400011282 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch10: 360044-370043 Solanum tuberosum
PGSC0003DMG400011282 10.0kb downstream 10.0kb downstream 12370 true ST4.03ch10: 370044-382413 Solanum tuberosum
PGSC0003DMG400011282 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch10: 372414-382413 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414757 5263 Asterids View MSA
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain